Pseudomonas pergaminensis: KUA23_02055
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Entry
KUA23_02055 CDS
T08563
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KUA23_02055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_02055
Enzymes [BR:
ppeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KUA23_02055
DNA repair and recombination proteins [BR:
ppeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KUA23_02055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
Zn_ribbon_6
AAA_30
iSirtuin
HypA
TrwB_AAD_bind
PIF1
Zeta_toxin
RUBY_RBDX
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
USW01562
UniProt:
A0ABD7TIN8
LinkDB
All DBs
Position
complement(454615..456834)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRVRVPFGRREMIGILVEVSDHSEVP
AEKLKPALAILDATPPLPPALFKLCLWTAQYYQHSLGDTLSWALPVLLRQGELAEARQER
FWSMVPGARLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKGLVQ
VEIRKHAPDARHEHWLAQPELPLNPEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYLQ
LIRETLQAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGE
ADIIIGTRSALFTPMKNPGLIIVDEEHDGSYKQQEGLRYHARDLALVRARQEDIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRYGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
IGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGRVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAHKPGQAEGFLDEA
CSAAERLLGELGLSGIELLGPVPAPMERRAGRYRAQLLLQATSRAPMHRLLSSWLLALEQ
LPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgcctagccctgccctcgcccctgcgccgcctgttcgattac
cgggccccggccggcgtgctgcgggcgcagttgcagccgggcatgcgcgtgcgcgtaccg
ttcgggcgccgagagatgatcggcatcctggtggaagtttctgaccacagcgaagtgcct
gccgagaaactcaagcctgccctggcgatccttgacgccaccccaccgctaccgcctgcg
ctgttcaagctgtgcctgtggacggcccagtattaccagcacagcctgggcgacaccctg
agctgggcgttacccgtgctgttgcgccagggcgaactggccgaagcgcgtcaggagcgc
ttttggtcgatggtgccgggggcgcgcctcgacgacccgcgcattgcccgcgcgccgcgc
cagcgtgaagccttggccacactggcgcagcaccctcacggcgtggctcaccagctatta
agcaagctgatgctgagcaaagacagcctcgacctgttgctcgccaagggcctggtgcag
gtggaaatccgcaagcacgcgcccgacgcccgccacgaacactggctggcgcagccggaa
ctgccgctgaaccccgagcaacgcgcggcctacgaggcgattcgcgccggctttgacagt
ttccacgcgttcctgctggccggcgtcaccggcagcggcaagaccgaagtctatctgcag
ttgatccgcgaaaccctgcaagccggaaaacaggcgctggtgctgatccccgagatcaac
ctgggcccgcaaaccctggcgcggttcgagcagcgcttcaacgcgcgtatcgccctggtg
cactcggcagtcaacgaccgcgagcgcctggagtcatggctggccgcgcgggatggcgag
gccgacattattattggcacccggtcggcgctgttcacgccgatgaaaaaccctgggctg
atcatcgtcgacgaggagcatgacggctcctataaacagcaggaaggcctgcgctatcac
gcccgcgacctggcgctggtgcgtgcacgccaggaagacatcccgatcgtgctgggctcg
gccacgccgtccctcgaaagcctgcacaacgcttacaccggtcgttacggcctgctacgc
ctgaacgagcgcgcgggcggcgccaagcagccacgttttctgcgcctggatgttaaaagt
cgcccgctggacagcggtatttccgggccgatgcaacaagccatcggccagacgcttgcc
gccggccaacaggtgctggtgttcctcaatcgccgtggttttgcgccgacgttgctgtgc
catgactgcggctggatgtccgagtgcgagcgctgcgacgcgcgcatgaccgtgcaccag
cgctacggcgaactgcgctgccatcactgtggccatgtggagcgtgtaccgcgccactgc
ccgcagtgcggcaaagtcgacctgcgaccggtgggcgcaggcaccgagcgggccgaagag
cgcctgggcatcctgttcccggattacccggtgctgcgggtcgaccgcgacagcacgtcg
cgcaaggacgcgatgaaccagctgttcgccaccatccagaaaggccagccgtgcatcctc
atcggcacgcagatgcttgccaaggggcaccattttccacgggtgaccctggtgtcgatc
ctggatgccgacggcgggctgttctccggggacttccgcgccagcgaacgcatggcgcag
ttgatcgtgcaggttgccggccgcgcgggccgcgccgaggagcctggccgggtgattatc
cagacgcacctggccgaccacccgctgctcatccaactgacagaacaaggctacttcgcc
ttcgccgagcaggccctgagcgaacgccgcgccgccggcttgccgccgttttcccacttg
gccttgctacgcgccgaggcgcacaagccggggcaggccgagggtttcctggatgaagcc
tgcagcgccgccgaacgtttgctcggcgagctgggtctgagcggcatcgaactgctcggc
ccggtgcccgcgcctatggagcgccgcgccgggcgttatcgtgctcagctactcttgcag
gcaacctcgcgcgcaccgatgcatcggctattaagtagctggttgcttgccctggagcaa
ctgcccagcggccggcaagtgcgatggtcattggatgtggacccggtagatttgtactga
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