Pseudomonas pergaminensis: KUA23_05470
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Entry
KUA23_05470 CDS
T08563
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppeg03032
]
KUA23_05470
03036 Chromosome and associated proteins [BR:
ppeg03036
]
KUA23_05470
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_05470
DNA replication proteins [BR:
ppeg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KUA23_05470
Chromosome and associated proteins [BR:
ppeg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KUA23_05470
DNA repair and recombination proteins [BR:
ppeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KUA23_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HTH_IclR
SSPI
Motif
Other DBs
NCBI-ProteinID:
USW02179
UniProt:
A0ABD7TL77
LinkDB
All DBs
Position
1204180..1204461
Genome browser
AA seq
93 aa
AA seq
DB search
MAITKDQLIADLAEAVDAPKTTVRALLDQLSQVVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctattactaaagaccaactgatcgctgacctggctgaagcagtagacgcaccgaaa
actaccgtgcgcgccctgctggaccaactgagccaagttgttgctgaccagctggaaaac
ggcggcgaaatcactctgccaggcgttggcaaactgaaagtgaccgagcgtcctgcccgt
actggccgtaacccttcgactggcgctgccatcgaaatcgctgccaagaaagttatcaag
ctggttgtggccaaaggcctgaccgacgctgttaacaagtaa
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