Pseudomonas pergaminensis: KUA23_06155
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Entry
KUA23_06155 CDS
T08563
Symbol
ydcS
Name
(GenBank) putative ABC transporter substrate-binding protein YdcS
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KUA23_06155 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppeg02000
]
KUA23_06155 (ydcS)
Transporters [BR:
ppeg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KUA23_06155 (ydcS)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
USW02304
LinkDB
All DBs
Position
complement(1375121..1376272)
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AA seq
383 aa
AA seq
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MSAHKTALLSALTTALLASASLQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKAYDWVS
GFEKETGCKVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIVGKRVQPINTALIPNW
KNIDPRLKDAPWYVVGQQTYGTPYQWGPNVLMYNTNVFKTAPTSWDVLFNAQNLPDGKPN
KGRVQAYDGPIYIADAALYLKSTKPELGIQSPYELTETQYKAVLELLRAQQPLIHRYWHD
TTVQMSDFKNEGVVASSAWPYQVNGLQNEKQPIASTIPKEGATGWADTTMLHTEAKHPNC
AYKWMDWSLQPKVQGDVAAWFGSLPAVPAACKESELLGAEGCKTNGFDQFEKIAFWKTPQ
AEGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacaagaccgcactgctcagtgccctgaccaccgcgctgctggccagcgcc
agcctccaggccgccgaaccgctcaaggcggtgggtgccggcgaaggccagctggatatc
gtcgcctggcccggttacatcgaacgtggcgaaagcgacaaggcctacgactgggtcagc
ggtttcgagaaggaaaccggctgcaaggtcaatgtgaagaccgccgccacctcggacgaa
atggtcagcctgatggccaagggcgggtatgacctggtcaccgcgtccggcgatgcttcg
ctgcggttgatcgtcggcaagcgcgttcagccgatcaataccgcgctgatccccaactgg
aagaacatcgacccacgcctcaaggacgcgccgtggtacgtggtcggccagcaaacctat
ggcactccctaccagtggggcccgaacgtactgatgtacaacaccaacgtgttcaagacc
gcgcccaccagctgggacgtgctgttcaacgcgcagaacctgccggacggcaagccgaac
aaaggccgtgtgcaggcgtatgacggcccgatctacattgccgatgcggcgctgtaccta
aagagcaccaagccggaactgggcatccaaagcccgtacgaactgaccgaaacccagtac
aaggccgtgctcgaattgctgcgcgcgcaacaaccgctgatccaccgctactggcacgac
accaccgtgcaaatgagtgacttcaagaacgaaggcgtggtggcctccagcgcctggccg
tatcaggtcaacggcctgcagaacgagaagcagccgattgcttcgaccattccgaaggaa
ggcgccaccggctgggccgacaccaccatgctgcacaccgaggccaagcacccgaactgc
gcctacaagtggatggactggtcgctgcagccgaaggtccagggcgatgtcgccgcttgg
ttcggctcgctgcctgccgtgcctgcggcctgcaaggaaagcgaactgctcggcgccgag
ggttgcaagaccaatggtttcgatcagttcgaaaagatcgccttctggaaaaccccgcaa
gctgaaggcggcaagttcgtgccgtacagccgctggacccaggattacatcgcgatcatg
ggcggcaggtga
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