Pseudomonas pergaminensis: KUA23_06565
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Entry
KUA23_06565 CDS
T08563
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppeg03016
]
KUA23_06565 (truD)
Enzymes [BR:
ppeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KUA23_06565 (truD)
Transfer RNA biogenesis [BR:
ppeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KUA23_06565 (truD)
Prokaryotic type
KUA23_06565 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
USW02386
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All DBs
Position
1466030..1467088
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AA seq
352 aa
AA seq
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MNDLQLLGPRAYGEALGCAVLKATAEDFQVDEVLDIPLTGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKSDPDMSAAQNDTLKILKTARHKR
KLQRGAHSANGFTLRLTQLAGDTAALDARLQLIAQHGIPNYFGAQRFGHNGGNVVDAREW
AARKALPEQRNVRSRLLSTARSFLFNKVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPASGATFELEQAVAADEADLRDWLVNAGMSQERRI
LRLPIGGLTWHYPSLDILQLEFVLPAGCFATALVRELVDLVPVGQTDNPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgcaactgttggggccacgggcctatggcgaggccctgggctgcgcggtc
ctgaaggcgaccgccgaagacttccaggttgacgaagtgctggatatcccgttgaccggc
gagggcgagcacctctggttgtgggtggagaagcgtggtctcaacaccgaggaagccgcg
cggcgtatcgccaaggcggcaggcgtgccgttgcgcaccgtcagctatgccgggctcaag
gatcgccaggcgttgacccgccaatggttcagcgtgcagctgccaggcaagtccgacccg
gacatgagcgctgcgcaaaacgacaccctcaagatcctcaagaccgctcgccataaacgc
aagttgcagcgcggcgcgcactcggccaatggtttcaccttgcgcctgacgcagttggcc
ggtgataccgccgccctcgacgcacggttgcagctgattgcccagcatggcattcccaac
tatttcggtgcccagcgctttggtcataacggcggtaacgtcgtcgatgcccgtgagtgg
gccgcgcgcaaagccttgccggagcagcgcaatgtgcgttcacgcctgctgtccacggcg
cgcagtttcctgttcaacaaggtgctggcggcacgtgtggccgacggctcctggcagcga
gcccaagtcggtgacctgttggcgtttaccgacagccgcagttttttcccggcaggcgaa
gccgaatgcagtgacccgcgcctggcgatcctggacctgcacccgaccggcccccagtgg
ggcgaaggtgattcacctgccagtggtgcaacctttgagctggaacaggcggttgccgcc
gatgaagccgacctgcgcgattggctggtgaatgcgggcatgagccaggaacgtcgcatt
ctgcgactgcccattggcggtttgacgtggcattatccctcgctggacattctgcaattg
gaattcgtcctgccggccggatgcttcgccactgccttggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacaacccatgcgtattctga
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