Pseudomonas pergaminensis: KUA23_08495
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Entry
KUA23_08495 CDS
T08563
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppeg03032
]
KUA23_08495 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_08495 (gyrA)
Enzymes [BR:
ppeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KUA23_08495 (gyrA)
DNA replication proteins [BR:
ppeg03032
]
Prokaryotic type
DNA Topoisomerases
KUA23_08495 (gyrA)
DNA repair and recombination proteins [BR:
ppeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KUA23_08495 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
USW02743
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Position
1867400..1870054
Genome browser
AA seq
884 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILSSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERV
QEPSEVEGEELEGEEFDGEVIAAGDDNVDEPTLDAAADEEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaattgtcggtcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgttcggatggcccagccgttttccctgcgctac
ctgctggtagacggccagggcaacttcggttcggtcgacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggccgacctgcataaa
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggccgtcatgccg
accaagatccccaacctgctggtcaatggttccagcggtatcgccgtgggcatggcgacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggcgctcatcgacaac
cccgagctgaccgtcgacgagctgatgcaatacatcccgggtccggacttcccgaccgct
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggtcgtggccgcatt
tacatgcgcgcccgctcgatcatcgaagacatcgacaaggtcggtggccgccagcagatc
gtcatcaccgaactcccataccagttgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtcaaagagaagaagctcgaaggcatcaccgagctgcgcgacgagtccgacaaagac
ggtatgcgcgtagtgatcgagctgcgtcgtggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaaagcgtgtttggtatcaacgtggttgcactgatcgac
ggccgcccgcgcatcctgaacctcaaggatctgctggaagccttcgtgcgtcaccgccgc
gaagtggtcacccgccgtaccgtgttcgaactgcgcaaggctcgcgaacgcggccacatc
ctggaaggccaggccgttgcgctgtcgaacatcgacccggtgatcgccctgatcaaagcc
tcgccaaccccgtcggaagccaaagaggcgctgatcagcaccccttgggaatccagcgcc
gtggtggccatggttgaacgtgccggcgccgattcgtgccgtccggagaccctggacccg
caatacggtctgcgcgaaggcaagtacttcctgtcgccggaacaggcccaggccatcctg
gaactgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gagatcctcaaccagatcggcgagttgatccgcatcctcagcagcgccgtgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgatgtgcgtcgcacc
gagattctcgacgcgcgcctcgacctgaccctgggtgacatgatcccggaagaagagcgt
gtggtgaccatctcccacggtggctatgccaagacccagccgctggctgcgtaccaggcc
cagcgtcgtggtggtaaaggtaaatcggcaactggcgtcaaggatgaggattacatcgct
cacctgctggtcgccaacagccacactacgctgctgctgttctccagcaaaggcaaggtg
tactggctcaagacctacgagatcccggaagcctcccgtgccgcccgtggtcgtccgctg
gtcaacctgctgccgctggacagtgatgaatacatcaccaccatgttgccggtcgaggaa
tacaccgaaggtcacttcatcttcatggccaccgccaaaggcaccgtcaagaagaccccg
ctggaatccttcagccgccagcgcagcgtgggcctgatcgccctggagctggacgaaggc
gacgtcttgatctctgctgccatcaccgatggcgagcgtgaagtcatgctgttctccgac
ggcggcaaggtcacgcgcttcaaggaatccgacgttcgcgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgcctgccagaagggcaaaagctgatttcgatgctgatcccggaa
gaaggcagccagatcctcaccgcttccgagcgtggttatggcaagcgtacggccatcagc
gagttcccggagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgaccgc
aacggccgtctggtcggcgcggtccaggtgctcgatggcgaggaaatcatgctgatttcc
gaccagggcaccctggtgcgtacccgtgtggctgaagtgtcgagcctgggccgtaacacc
cagggcgtgaccctgatcaagctggccaaggacgaaaaactggtcggcctggagcgtgtc
caggaaccatcggaagtcgaaggcgaagagctggaaggtgaggagtttgacggcgaggtg
atcgcagccggcgatgacaacgtcgacgagccaaccctcgatgctgccgcagacgaagaa
gaaccgcaggaataa
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