Pseudomonas pergaminensis: KUA23_08535
Help
Entry
KUA23_08535 CDS
T08563
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppeg03032
]
KUA23_08535 (ihfB)
03036 Chromosome and associated proteins [BR:
ppeg03036
]
KUA23_08535 (ihfB)
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_08535 (ihfB)
DNA replication proteins [BR:
ppeg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KUA23_08535 (ihfB)
Chromosome and associated proteins [BR:
ppeg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KUA23_08535 (ihfB)
DNA repair and recombination proteins [BR:
ppeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KUA23_08535 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
USW02751
UniProt:
A0ABD7TMY2
LinkDB
All DBs
Position
1878916..1879212
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEEEGV
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctgctctcatccaag
gatgttgagctggctatcaagaccatgctcgagcaaatgtcccagtgcctggcgaccggg
gatcggattgagatccgtgggtttggcagcttctccttgcactatcgtgcaccccgtgta
ggtcgtaatccaaagaccggccagtccgtcagccttgacggcaaattcgtacctcacttc
aagccgggcaaggaattgcgcgaccgggtgaacgaagaagaggaagaaggcgtctga
DBGET
integrated database retrieval system
