Pseudomonas pergaminensis: KUA23_08680
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Entry
KUA23_08680 CDS
T08563
Name
(GenBank) polysaccharide biosynthesis protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg00541
O-Antigen nucleotide sugar biosynthesis
ppeg00552
Teichoic acid biosynthesis
ppeg01100
Metabolic pathways
ppeg01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KUA23_08680
00552 Teichoic acid biosynthesis
KUA23_08680
Enzymes [BR:
ppeg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
KUA23_08680
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
USW03938
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Position
1909997..1911994
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AA seq
665 aa
AA seq
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MMDMLRIYLLGLPRRYKRFLQVLTDVLLVWFALWMAFVVRLGIDEMINPIRMHPWLFISA
PLTAIPLFVRFGMYRAVMRYFGNDALIAIVKAVSLSSLILALVVYWYSNHQNVVPRSIIF
NYWWLSLITIGGLRLAMRQYFLGDWFTAAQHVPFTSRDNGLPKVAIYGAGAAGNQLVAAL
RMGRVMRPVAFIDDDESISDRVISGLQVYKPKHIQRMVDATGAEEVLLAIPSSNRARRRE
ILGYLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPAQADLLEHCIKGQS
VLVTGAGGSIGSELCRQILSLKPTTLLLFEHSEFNLYSILSELEQRVTRESLSVKILPIL
GSVRNQPKLLDVMKTWHVDTVYHAAAYKHVPMVEHNIAEGVLNNIIGTLNTAQAALQAGV
ANFVLISTDKAVRPTNVMGSTKRLAELTLQALSRELAPVLFGDRSNISRVNKTRFTMVRF
GNVLGSSGSVIPLFHKQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGMGGDVFVL
DMGEPVKIVELAEKMIHLSGLSVRSEKNPHGDIAIEFTGLRPGEKLYEELLIGDNVVATR
HPMIMSANEDHLPWDALKVKLTELLAAVEGDDYSRVRQLLRDTVSGYAPDGEIVDWIYQQ
RRLDP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
attatggatatgttacggatctatttgttgggtctacctcgcagatataaacgattcctt
caggttctcaccgacgtcctactcgtgtggttcgcactatggatggcattcgttgtgcgt
ttggggatcgatgaaatgatcaaccctatccgtatgcacccatggcttttcatctccgcc
cccctgactgccatcccgctattcgtccgttttggtatgtaccgtgctgtcatgcgttac
tttggtaacgatgcattgattgccattgtcaaggcggtaagcctttcatcgttgatattg
gcgcttgttgtttactggtatagcaatcatcagaacgtagtgccgcgctctatcattttc
aactactggtggctgagcctgatcactattggtgggctgcgtctagcgatgcgccaatac
tttttgggagattggttcacggcagcacaacatgtaccattcactagtcgcgacaacggg
ttacctaaagttgccatctacggcgctggtgccgcgggtaaccagttggtcgctgccctg
cggatggggcgagtgatgcgaccggtggcgtttattgacgacgatgaaagtatcagtgat
cgcgtgatttcgggattgcaagtctacaagcccaaacacatccaacgcatggtggatgcg
acgggagctgaggaagttctactggctatcccttcttcgaaccgagctcgacgccgtgaa
atcctgggttatctagagggatttccacttcacgtgcgaagcgtccctggcttcatggac
ttggccagtggtcgagttaaggtagacgatatccaggaagttgatatcgccgatttgctt
ggccgtgacgccgttcctgctcaagcagatttgcttgagcactgcatcaaggggcagagc
gttctggtcacgggtgccggtggttcaatcgggtctgaactgtgtcggcagatattgtct
ctcaaaccgacaacattgcttctctttgagcatagtgagtttaatctctacagcattctt
tcagaactcgagcagcgggtcacacgagagtctttgtctgtcaaaattctgcccatttta
ggttctgtgcgtaatcagccaaagctgctcgacgttatgaagacctggcacgtagacact
gtttatcatgcagcggcctataaacatgtgccgatggttgaacataatattgcagaaggt
gtgttgaataacattattggcaccctcaatactgcacaggctgctcttcaggcaggcgtt
gctaattttgttctgatttcaacagataaggctgttcgcccaaccaatgtaatgggcagt
accaagcgcttggcagagttaacacttcaggcactgagtcgtgaattagcccccgtccta
tttggcgacagatccaatatttctcgcgtcaataaaacgcgctttacaatggtccgattc
gggaatgtactggggtcttcgggttctgtcatcccgctgtttcacaaacagatcaaatct
ggcggtccattgactgttactcatccaaaaatcactcgctacttcatgaccatacctgaa
gcagcgcaactcgttatccaggctggttccatggggatgggaggcgatgtatttgtatta
gatatgggcgagccagtaaaaatcgtggagctggctgagaagatgatccacctttctggt
ttgagtgtgcgctccgaaaaaaatccccatggtgacattgcgattgaattcactggcctg
cgtcctggtgagaaactttacgaagagttactcattggcgataacgtggtggccacgcgg
cacccaatgattatgagtgcgaatgaagaccacctgccttgggacgcactcaaagtcaaa
ttgacggaattgttggccgcagtagaaggcgacgattactctcgtgttcgccagcttttg
cgcgacaccgtcagcggctacgcccccgatggtgaaatcgtcgactggatctaccaacag
cgccgcttggacccttga
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