Pseudomonas pergaminensis: KUA23_09790
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Entry
KUA23_09790 CDS
T08563
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KUA23_09790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppeg03021
]
KUA23_09790
Transcription machinery [BR:
ppeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KUA23_09790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
HTH_40
GerE
HTH_Tnp_ISL3
HTH_28
HTH_11
HTH_29
Phage_antitermQ
DUF722
HTH_24
DUF1492
Terminase_5
HTH_Mga
HTH_7
Phage_NinH
Homeodomain
Motif
Other DBs
NCBI-ProteinID:
USW02980
LinkDB
All DBs
Position
complement(2137276..2137797)
Genome browser
AA seq
173 aa
AA seq
DB search
MSVGEPPFQREITQLYSEHHGWLLTWLRRKLGCRQNAADLAQDTFARILNARESVAGIRE
PRAYLSTTARRLLIDQARRKQIEQAYLQELALTVDALEGFQSPEQIHTTLEALEQIAFIL
EGMHEYSRQAFVLYYLEEMTQQQIARQLKLSERTVRKYLIKALMHCGHSMDTD
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgggtgaaccgccattccaacgggaaattacccagctctacagcgagcatcat
ggctggctgctcacctggctacgccgcaaactgggctgccggcagaacgcagccgacctg
gcgcaggatacctttgcacgcattctgaacgcgcgcgagtctgtcgccggcattcgcgag
ccccgggcgtatttgagcaccaccgccaggcgcctgctcatcgaccaggcgcggcgcaag
cagatcgaacaggcctacctgcaggaactggccctcaccgtggacgcgctggaagggttt
caatccccggagcagatccacaccaccctcgaagccctcgaacagatcgcgtttatcctg
gaaggcatgcacgaatactcgcgccaggcattcgtgctgtattacctcgaagaaatgact
caacagcaaatcgcccgacagctcaagttgtcggaacgcaccgtgcgcaaatacctgatc
aaggcgctcatgcattgcggccacagtatggacactgattga
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