Pseudomonas pergaminensis: KUA23_10140
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Entry
KUA23_10140 CDS
T08563
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KUA23_10140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppeg03021
]
KUA23_10140
Transcription machinery [BR:
ppeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KUA23_10140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_24
PhyR_sigma-like
HTH_11
HTH_23
HTH_31
HTH_Crp_2
HTH_28
HTH_7
Crp
HTH_IclR
Rv2175c_wHTH
TnsD
GerE
HTH_20
Motif
Other DBs
NCBI-ProteinID:
USW03039
LinkDB
All DBs
Position
2207851..2208366
Genome browser
AA seq
171 aa
AA seq
DB search
MSSTPAVSPTELATLYRQQHRWLQQWLWRRLNCPQSAADLAQDTFLRLLAKNQPLEIHAP
RSFLAKVAQSVLSNHFRRQKLEKAYLQALALLPEDAAPNAETQWILLETLMALDEVLSRL
ALPVRQAFLWSQLDGLSHGEIAERLGTSITTVKRYIVKAGAQCILLDSQRS
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgactcctgcggtaagccccactgaactggccaccttgtaccgccagcaacac
cgttggttgcagcaatggctgtggcgtcgcttgaactgcccgcagagcgccgccgacctg
gcccaggacacattcctgcggctgctggcgaagaaccagccccttgaaatccacgcgccg
cgcagcttcctggcgaaagtggcgcaaagcgtgctgtccaaccacttccgtcggcagaaa
ctcgaaaaagcctacttgcaggccttggccctgttgccggaagacgccgcgcccaacgcc
gaaacccagtggatcctcctcgaaaccctgatggccctcgatgaagtgctcagccgcctg
gccttgcccgtgcgccaggcgttcctgtggtcgcagctcgatggcctgagccacggcgag
atcgccgagcgcctcggtaccagcatcaccacggtcaaacgctacatcgtcaaggcgggt
gcacaatgcatcttgctggacagccagcggtcatga
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integrated database retrieval system
