Pseudomonas pergaminensis: KUA23_11420
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Entry
KUA23_11420 CDS
T08563
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KUA23_11420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppeg02000
]
KUA23_11420
Transporters [BR:
ppeg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KUA23_11420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
DUF1846
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
USW03266
LinkDB
All DBs
Position
complement(2467639..2468670)
Genome browser
AA seq
343 aa
AA seq
DB search
MNPRIALSCLSLALLASTAHAAPTLYLGMNGGTMERVYADKVLPAFEKANNVKVVIVPGT
SSDILAKVQANKDNPQMHVMFLDDGIMYRAISMGLCDKLTPSPTLEQIPAKARIKDEAVA
VTLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKEKVVFQSLASSTFGLHGFLMFNRIQ
GGDETNVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAIFPLTPTQVATQKLLGVP
MEYAQPKEGAVVLNVAECVIARNDQPELAQKLAAFLLTAEAQAPALEEGDQIPSNPTTPT
TDKTRARVEAMQGYLQTAISIDWDQVNQARPEWNARWSRSIER
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacgtattgcgctgtcctgcttgtccctcgccctgctcgcctccaccgcgcat
gccgcgcccacgctgtacctgggcatgaacggcggcaccatggaacgggtgtacgccgac
aaggtgctgcccgcgttcgagaaggccaacaacgtcaaggtcgtgattgtgcccggcacg
tcgtcggacatccttgccaaggtccaggccaacaaagacaacccacagatgcacgtgatg
ttcctcgacgacggcatcatgtaccgcgccatctccatgggcctgtgcgacaagctgacg
ccgagcccgaccctggagcagatcccggccaaggccagaatcaaggacgaagccgtggcc
gtgaccctcggcgtcaccggcctgggctacaacgccaagatgttcaaggaaaaaggctgg
gcggcgcccacctcgtggatggacctggccgacccgcgcttcaaggagaaagtggtgttc
cagtccctggcttcatccaccttcggcctgcacggtttcctgatgttcaaccgtatccag
ggtggcgatgaaaccaacgtcgagcccggcttcaaggcctggccgaaaaccgtcggcccc
aacgtgctggaatacatcgccagctcggcgaaaatatccgaaatggtgcagaccgacgaa
gccgcgattttcccgctcaccccgacccaggtcgccacccagaaactgcttggcgtgccc
atggaatatgcgcaacccaaggagggtgcggtggtgctgaacgtggctgagtgtgtgatc
gcgcgcaacgaccagccggaactggcgcagaagctcgccgcgtttttgctgaccgccgaa
gcccaggcccctgcgctggaagaaggcgatcagatcccgtctaacccgaccacgccgacc
accgacaagacccgtgcgcgggtggaagcgatgcagggttacttgcagacggcgatttcg
attgactgggaccaggtcaaccaggcgcggccggagtggaatgcgcggtggagtcggtcg
atcgagcgttaa
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