Pseudomonas pergaminensis: KUA23_13175
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Entry
KUA23_13175 CDS
T08563
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
ppeg
Pseudomonas pergaminensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
OCRE
DUF2944
Motif
Other DBs
NCBI-ProteinID:
USW03979
LinkDB
All DBs
Position
complement(2912758..2917560)
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AA seq
1600 aa
AA seq
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MDVKTVDVESVFRDFRECLNTFDDWAESFWSFSALDIEQVFKVGDEVALVAPINRSLFPS
STVATCQANGKLTLVHMFQSTQFVPIGNTPVVLQRVDLNGGPLGEPIHKTIGPSGILDID
ECERDQRYQVNFYPNVSKDHIKALYASYQSVIDALEVRLREEWESTFKAQWKDYTDANPL
DQRRMLEKAFLYGMGKALYSVWDNFTQLFDLLADIQTHSETLLRYISQTELDELLKLGKD
SIARGLLVLSDEPLMFIYVSAISSWIRMLPPQEMNEVMGEITGEVLIGLLLIRAMGAMGV
TVRLGAQVMSHIKSGRARQWLEKLADHLVGPRLEAHVEAAKPLLLGSAGTPIKVIPDAPL
KAGDQLVSNPVPMVRDKTTQRTVLVRQEPVDDLPAVAKNPAGDAAASSDKTATNGCPVSM
VTGEELLTLTDGVLDGILPFEWTRLYRTSAVEMDCGLGFGWSHSLAHRLSISGDSVVWTD
HENRSTTLPLPTVSRPAITNSLAEAAIYLGSLPDELVLAQASRFYHFRDGVLTAISDAYD
NRLRIARDFLGRIERLDNGVGRSLLLRYASGRIVAVDYQIQRIVDEGPYVWVTEQTVVSY
AYDDLGRLISATNAVGESEVYRYDDQHVILERGLAGGASFYWEWERAGKAARCVRHWASF
SQMDTRYAWDDNGQVTVFNADGSQEVYVHDQRARLVQRVDPDGAEHFKSYDDNGRLTVEQ
DPLGAITAYQYDEAGRLVALFPGDDEPTTYEHDNGFVRVVRRGEAVWKYERNDRGDVVRK
VDPDGNSTEYSYNKRGQLTQVLLPDHSCHRLVWNERGQLLEEQLPNGGFKRYRYDDLGRR
VAREDEHGALTQYQWDAAGRLLKLTQPGGATREYSYNAYGKITAERDELGHVTRYEYADG
LHLISRRINADGSQVKYRYDNARLLLTEIENEVGETYRLQYHANGLIQQETGFDGQRTAY
VYDLNGNLQEKTEHGDDGSQLVTRYERDHAGRLVRKTLPDGNKVDYAYDRQGNLLSVEDG
HWALAYEYDAQNRLTAEHQGWGTLRYGYDACGHLQNLRLPDNNRLTFNHDKGGHLATVEL
NGAVLTSHLFTAGREQQRQQGQLLSHYQHDHQGRLFTQSINDAEGPLYRRHYDYDKSGNL
TRLLDTRKGDHRYHYDPLSRLTRADHSQDEQERFGHDPAGNLLMQNRPGPDIIAGNRLMI
QGDHHYDYDAFGNLIRERRGKGHQLVTEYRYDCQHRLIGVKTPNGQTASYRYDPFGRRIS
KTVDDITTEFFWQGDKLIAEHHANRHRSYLYEPDSFRPLALLEGFGPKETKPYHYQLDHL
GTPQELTAPDGEIVWSAHYRAYGEISRLDIGKVDNPLRFQGQYFDKESGLHYNRHRYYNP
DVGRYLTPDPVKLAGGINAYQYAPNPTGWIDPLGLSTCPGGDGCKQGAISQSSALNVNDG
EPALPQLTRAERQTRIDELAESNIHRRLAELETSIPGAHFLEKHGAQTSLASQLERVTTA
RNPTTGEIEIFDRGRRAGTPRPPSAATHFLSHRDQFNAIERAILIFKLNGRAETSRPMDM
GKIIGEGYKREGLEYGKQTKAVVHLNTDGKPITAYTEFDR
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagacggtcgatgtcgagagcgtctttcgcgatttccgggaatgcctgaac
acctttgatgactgggcggaaagcttctggagcttttccgcgctggatatcgaacaggtc
ttcaaggtgggggatgaagtggcgctagtagcgccgatcaaccgctccctgttcccgagc
agcaccgtcgcgacttgccaggccaacggcaagctgaccctggtgcacatgttccaaagc
acgcaatttgtacccatcggcaacacgccggtggtgttgcagcgcgtcgacctcaacggc
ggcccactgggcgagccgatccacaagaccatcggcccgagcggcattctcgacatcgac
gagtgtgagcgcgaccagcgctaccaggtcaatttctaccccaatgtttccaaggaccac
atcaaggcgctgtatgcctcttatcaatcggtgattgatgcattggaagtgcgcctgcgc
gaagagtgggagagcaccttcaaggcccagtggaaggactacacagacgccaatccactt
gatcagcgcaggatgctggagaaggcgtttctttacggaatgggtaaggcgctttacagc
gtttgggacaatttcacgcaattgttcgacctgctggcggatatccagacccacagtgag
acgttgctgcggtacatctcccagaccgaattggatgaactgctgaaactcggcaaagac
tcgattgcccgcggcctgctggtactcagcgatgagccgctgatgtttatttatgtgtcg
gcgatttccagctggatacggatgttgccgccgcaagaaatgaacgaggtgatgggggaa
atcaccggcgaggtgttgatcggcctgttgctgataagggccatgggggcaatgggtgtg
acggtgcgcctgggtgcccaggtgatgagtcatatcaagtctggccgggcacgccagtgg
ttggagaagctggccgatcacctggtcggacctcggttggaagcgcatgtcgaagcggcc
aaaccgttgttgctggggagcgcggggacaccgatcaaggtgattccggatgcgccgttg
aaggctggggatcagttggtttccaacccggtgccgatggttcgggacaagaccacgcaa
cggacggtattggtgcggcaagagcccgtggatgacttgccggctgttgctaagaatccg
gctggggatgcggccgcctcttccgacaagacagccaccaacggctgcccagtgtcgatg
gtcacgggcgaagaattgctgaccctcaccgatggggtgctggacggcattttgccgttt
gagtggacccggttgtaccgcaccagtgcagtggaaatggactgcgggctggggtttggc
tggagtcactcgctggcccatcggctgagtatttccggtgattcggtggtgtggaccgat
catgaaaatcgctcgaccaccctgcccttgcccacggtttcacgccctgcaatcaccaat
agcctggctgaagcggcgatctatctcgggtcgttgcccgatgaactggtgctggctcag
gcgtcacgtttctaccacttccgcgacggtgtgctgacagcgatcagcgacgcgtatgac
aaccggctgcgtattgcccgggattttctggggcgcattgaacgcctggataacggcgtg
gggcgctcgctgttgttgcgctacgcatcgggccggattgtggcggtggactaccaaatt
caacgcatcgtggacgagggtccgtatgtttgggtgacggaacagacggttgtttcctac
gcctatgacgaccttggccgactgatttcagcgactaacgctgtcggcgaaagcgaggtt
tatcggtacgacgatcagcacgtcattcttgagcgcggcctggccggtggggcgagtttc
tactgggagtgggaacgggctggcaaggcggcgcggtgtgttcggcattgggcgagcttt
tcgcagatggacacgcgctatgcctgggacgacaacgggcaggtcacggtgtttaacgcc
gatggcagccaggaagtctacgtgcatgaccagcgcgcacggctggtgcagcgggtggat
ccggacggggccgagcacttcaagtcctacgatgacaacgggcggctgacggttgagcag
gatccgctgggcgcgatcacggcgtaccagtacgacgaagccggacgtttggtggcgttg
tttccgggggacgatgagccaacgacctacgagcatgacaacgggttcgtacgggttgtg
cgccggggtgaagcggtttggaagtatgagcgcaatgaccggggcgatgttgttcgcaag
gtcgatcctgacggcaattcgactgagtacagctacaacaaacgaggacaactgacgcag
gttttgctgcccgatcacagctgtcatcggctggtttggaatgagcgtgggcagttgctt
gaggagcagttgccgaatgggggattcaagcgctatcgctatgacgatcttggacggcga
gtagcgcgtgaggacgagcatggagcgctgacccagtatcaatgggacgcagcaggccgc
ttgcttaaactgactcagcccggcggtgccacacgggaatacagctacaacgcgtacgga
aaaatcaccgccgaacgggatgaactcggccacgtcacccgctacgaatacgccgacggc
ctgcacctgatcagccgccgcatcaatgccgatggcagccaggtcaaataccgttacgac
aacgcgcgtttgttgctgaccgagatcgaaaacgaggttggcgaaacctaccgactccag
tatcacgccaatggcctgatccaacaggaaaccgggtttgacggtcagcgcacggcttac
gtctacgacctcaacggcaacctgcaggaaaagaccgaacacggcgatgacggcagtcag
ctcgttacccgctacgagcgcgaccatgccggtcggctcgtaagaaaaaccctgcctgat
ggcaacaaggttgattacgcctacgaccgccagggcaatctcctaagcgtcgaagacggc
cactgggccctggcctacgaatacgacgctcaaaaccgcctcaccgccgaacaccaaggc
tggggcaccctgcgctacggctacgacgcctgcggccacctgcaaaacctgcgcctgccg
gacaacaaccgcctcacctttaatcacgacaaaggcggtcacctcgccaccgtcgaactg
aacggcgcagtactcacctcgcacctctttactgcgggtcgcgaacagcaacgccaacaa
ggccaactgctcagccactaccaacacgaccaccagggacgcctgttcacccagagcatc
aacgacgccgaaggcccgctataccgccgtcattacgactacgacaaatccggcaacctc
acccgtctgctcgacacccgcaaaggcgatcaccgctaccactacgaccccctaagccgc
ctcacccgcgccgaccactcccaagacgagcaagaacgcttcggccacgaccccgccggc
aacctgctcatgcaaaaccgccccggccccgacatcatcgccggcaaccgcctgatgatc
cagggcgaccaccactacgactacgacgccttcggcaacctcatccgcgaacgacgcggc
aaaggccatcaactcgtcaccgaataccgttacgactgccagcatcggctgatcggcgtt
aaaacgcccaatggccagaccgctagctatcgctacgacccatttggccgccgcatcagc
aaaaccgttgatgacataacgaccgagttcttctggcagggcgacaaactcatcgccgag
caccacgcgaaccgccaccgcagctacctctacgaacccgacagcttccgcccgctggcc
ctgctggaaggcttcggcccaaaggaaaccaagccctaccactaccaactcgaccacctc
ggcaccccacaggaactcaccgccccggatggcgaaatcgtctggtccgcgcattaccgc
gcgtatggcgaaatcagccgtctcgacataggaaaagtcgacaacccgctgcgcttccag
ggccagtattttgataaagaaagcgggctgcattacaaccgtcatcgctactacaatccg
gatgttggtcgttacctcacgccagacccggtgaaattggcgggtgggatcaacgcctac
cagtacgcgcccaaccctacggggtggatagatccgctaggcttgagtacatgcccaggc
ggagatggttgcaagcaaggcgccatttctcaaagctctgcgctaaacgtcaatgacgga
gagcctgctttaccacaactaacgcgcgctgagcgtcaaacaagaattgatgagttggct
gagtcaaacattcatcgacgattagcggagcttgagacatcaattccaggagcacacttc
ttggaaaaacatggggctcaaacctcattggcgtcccaacttgagcgggtaacaacggct
agaaatccgactactggcgagatcgagatctttgacagaggaagaagagcaggcacacca
agaccaccaagtgctgccacgcactttcttagtcacagagatcaatttaatgcaattgag
cgagctattctgatatttaaactcaatggccgagcagaaacctcaagacctatggatatg
gggaaaattatcggcgaaggatataaaagagaaggactagaatatggaaagcaaactaaa
gcagttgtgcatttaaacacagatggaaaaccaatcacagcctatacggaattcgacaga
tga
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