Pseudomonas pergaminensis: KUA23_16700
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Entry
KUA23_16700 CDS
T08563
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_16700
DNA repair and recombination proteins [BR:
ppeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KUA23_16700
Archaeal homologous recombinant proteins
KUA23_16700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
USV98709
UniProt:
A0ABD7TAS5
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All DBs
Position
3713753..3714994
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AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLKWLLVQLKDHQPDALLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPDAKGKVAAWCLALPFLRPAEVTGAHLGDDYLHGIGQVHEGLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPAKLFDRSVAYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQVLDVTFQGQCLVSVEPILIPRSVDLQRLEAAPLADILTAL
ADLPDVDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAGKRGSD
DTDDERLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEVQQEAEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcatacctccgactggcacctgggccaaaaccttcatggccaggaacgc
gacttcgaacacgcctgtttcctcaaatggctgttggtccaattaaaggaccatcagccg
gatgcgctgctcatcgccggcgatatcttcgacacggtcaacccgccgctcaaggcgcag
gaacggctgtatgacttcatcatcagcgcccatgaacaaaacccgaaactgaccatcgtg
atgatcgccggcaaccacgattccggctcgcggatcgaactgcccgcgccgttgatgcgt
cgcctgcgtacccacgcgctcggccgcgtgctgtggctggatgacggccagctggacgcc
gaacgcctgctgatcccgctgccggatgccaagggcaaggtcgccgcctggtgcctggcc
ctgcccttcctgcgcccggcggaagtcacgggggcacacctgggtgacgattacctgcac
ggtatcggccaggtgcatgaagggctgatcgccgccgccaacgccaagcgcaaaaaaggc
caggcgctgatcgccatcagccacgcgcacatggccgggggctcggtgtcggaagactcc
gagcgcagcctgatcatcggcaatgccgaggcgttaccggccaaactgttcgacagaagt
gtcgcctatgttgccctcggccatttgcacaagccgcaaaaggtcaatggcgaagagcgc
attcgctacagcggctcgccgattccactgtcgttttccgaaatcggctacaaacaccag
gttctcgacgtgacgttccagggccaatgcctggtaagtgtcgaaccgatcctgatcccc
cgctcggtcgacctgcaacgcctggaagccgccccactggcggacatcctcacggcgctg
gccgacttgccagacgtcgacctgctcgccgaaacccagcgccatccctggctggaagtg
cgcgtgcgcctcgacgagccgcagcccgacctgcgccagcagatcgaaaccgcactgcaa
ggcaaggccgtgcgcctggtgcgcattgccgccgagtacgccggcaaacgcggcagcgac
gacacggacgatgagcgcctgatcgaacttgaccagctcacgccccaggaactgttcagc
cgtgcctggcaggacagctacggcagtgaagtggatgaacagaccttgaaggatttcgcc
gtgctgcttcaggaagtgcaacaggaggctgaacagccatga
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