Pseudomonas pergaminensis: KUA23_16840
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Entry
KUA23_16840 CDS
T08563
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02025
Biofilm formation - Pseudomonas aeruginosa
ppeg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KUA23_16840 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KUA23_16840 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppeg02044
]
KUA23_16840 (tssM)
Secretion system [BR:
ppeg02044
]
Type VI secretion system
Imp/Vas secretion system core components
KUA23_16840 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
AAA_16
WGG
Motif
Other DBs
NCBI-ProteinID:
USV98735
UniProt:
A0ABD7TBA5
LinkDB
All DBs
Position
complement(3758038..3761400)
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AA seq
1120 aa
AA seq
DB search
MNAFFKGVGTVLRKSWAWSLLLVFSCALLVWFFGPLLAVDDYRFWQSSTARLLTISAMLL
FWGLAMVVVGARRAVRLDQPEHQDRHRRQALISNEIGHIRGRFKEALHTLKTSRCYGERS
ERSRNELPWYLLIGEQGSGKTALLSANGLQSPLDRTEAARPGTSAYCDWYFADEAVLVEL
AGRYLDQPDPSVDGSGWSALLGLLKSWRRSRPLNGVVVTLSVDTLLRSHEHDLQLQARNV
HTRLQDIQQVLHVDVPVYLALTQADRLPGFAEFFDAQQGDSADDVLGGCLAAGTTGIDVA
EVREAFDALLQRLGAELIPRLHQERNLERRGQMLEFPRQVARLGDGLGLFIETAFSAHRN
QRINGLRGFYLTSAKSSDGRAHFVQGLFNRVIFAEADLAGLHSPERQRIRRRHGALALAA
SILIGAVAALWMHSYSFNHQRLVQLLALTSPTPSTPLGLDDSPALLALLDSRLAATRVFP
PQAAARWVDRAGLYQGDVSRPLLDGAYEESLRQQLLPFVTSLLETQVQASLGDRERLLDS
LRAYLMLNLRDRRDTAWLAEYVAGQWPAGNAGDTLAHKRLSEYLMRLLEQPFEVALNDES
VAQARQALRGESLAEVVYRALRDQARNLEPHHLAAGPAFSRGESAVPGFYTKKYVEYFER
QGPQLVNAIAQDNWVLGEATDLSVMALRKLMLELEQRYFSEYADAWSEALGRLRLVESDS
LRQSAQQLASLASSQSGVLQVLQQVRENTRLVPASQRFEAVSQHAGVLGTAATGVLNSVV
PADTARRALQRRFEPLHQLLDDEQNPAGEWMQALRLLDELQLQLSTLSRESSPEQAAYKL
ARQRMEGQQPLLGNLRDTAMRLPAPLKGWFEGVAEQSWRHLLDDAYVYINQRYQSEVHGF
YAKAIRQRYPFNAHAGGDVALDDFQAFFKPRGTMERFYDGFLRPFVSAEGNRYRLRSLEG
HSLPVSRSLLDQLAKAQTIRQGFFTEDQGDWAVRFTLAPYSLDQAVSRATLRVGDQQLEY
RHGPIVPMAFRWPIDTDNGRGSLILERGAERPLGIEKDRGAWSLFRLFELMQNEAASGRD
AQILKADLAGLRANYLLTSQRNPSPFQMATWRTFRLPEQL
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcttcaagggcgtgggcacggtgctgcgcaagagttgggcctggagcctg
ttactggtgttttcctgtgcgctgctggtgtggtttttcgggcctttgctggcggtggat
gactaccgtttctggcaaagttccactgcccgtttgctgaccatcagcgcgatgctgttg
ttctggggattggcgatggttgtggtaggcgcacgccgcgctgttcgcctcgatcagcct
gaacaccaggaccgtcatcgacgacaggcattgatcagcaacgaaattgggcacatacgc
gggcgctttaaagaggccctgcacaccctgaaaacttcacgctgctatggtgaacgcagc
gaacgctcacgcaacgagctgccctggtatctgttgatcggcgagcaggggagcggcaaa
acggcgttgctgtccgccaatgggttgcagtcaccccttgaccggaccgaagcggcgcgt
ccaggcacgagcgcctactgtgactggtatttcgcggatgaggcggtactggtcgaattg
gctggccgctacttggaccagccggacccttcggtagacgggtcaggttggtcggcgttg
ctgggcctgctcaaatcgtggcgccgatctcggccgctcaatggcgtggtggtgacgctg
tcagttgatacgctattgcgcagccatgaacacgacctgcaactgcaggcgcgtaacgtg
cacacccgcttgcaggatattcagcaggtattgcatgtggatgtgccggtttacctggca
ttgacccaggctgatcggttgcctgggtttgccgagttcttcgatgcgcaacagggcgac
agcgccgacgatgtgttgggtggttgcttggcagccggtacgaccggcattgacgtcgcc
gaagtgcgtgaagcattcgacgcgttgctgcagcgcctgggcgccgagctgatcccgcgt
ttgcatcaggagcgaaaccttgagcgacggggccagatgctggagttcccccggcaggtt
gcacgcctcggcgatggcttgggcctgtttatcgagactgcgttttccgcccatcgtaat
cagcgtatcaatggcctgcgagggttctacctgaccagcgcgaagtcaagcgatggacgt
gctcactttgtccagggcctgttcaatcgcgtgatttttgccgaggctgatctggccggg
ctgcattccccggagcggcagcgtatacgtcgacgtcacggggcattggcgctggctgca
tcaatccttatcggcgcagtggcagcgttatggatgcacagctattcgttcaaccatcag
cggttggtacagctgctggcattgaccagccccacgccttcaaccccgctcggcctggac
gatagcccggcattgttggcgttgctggacagtcggctggccgcgacacgcgtatttcca
ccgcaggcagcggcacgatgggtcgatcgggccggtttatatcaaggcgacgtcagtcgt
ccgctgttggacggcgcctatgaagagtccctgcgtcagcaactgctgccctttgtcacc
tccctgctcgaaacgcaggtgcaagcgagcctgggtgaccgcgagcgcttgttggatagc
ctgcgcgcctacctgatgctcaacctgcgcgatcgacgtgatacggcttggctggcggaa
tatgtggccgggcaatggcctgcggggaatgcaggggatacattggcacataagcgactg
agcgaatacctcatgcggctccttgaacaaccctttgaagtggcgttgaacgatgagtcg
gtagcccaggctcgccaggcgttacgcggcgaatcactggccgaggtggtctaccgtgca
ctgcgtgatcaagcgcggaatctggagcctcaccacttggctgcaggtccggcgttctcc
aggggcgagtcagccgttccggggttctataccaaaaagtacgttgagtatttcgagcgg
cagggccctcagttggtcaatgccattgcccaggataattgggtgcttggtgaggcgact
gatctcagcgtaatggcgttgcgtaagttgatgctggagctggagcagcgctatttcagt
gaatacgccgatgcctggagtgaagcgcttggtcgactccgactggtagaaagtgacagc
ctgagacaaagtgcgcagcagttggcaagccttgcatccagccagtcgggggtgctgcag
gtgttgcagcaggtgcgcgaaaacacccgtctggtgccggcatcgcagcggtttgaggcg
gttagccagcacgcgggtgtgttgggcacggcagccacaggcgtgctgaacagcgtggtg
ccggcggataccgcccgacgtgcattgcagcgccgcttcgagccattgcaccaattgctc
gatgacgagcagaaccccgctggcgagtggatgcaggcattgcgcctgctggacgaactg
cagctgcaattgtcgacactgagccgggagagttcgccggagcaggcagcgtacaagctg
gccaggcaacgcatggaggggcagcaaccgctcttggggaacctgcgggatacggccatg
cgcttgcctgcgccgctcaagggctggttcgaaggggttgccgagcagagttggcgccac
ctgctggatgacgcctatgtgtatatcaatcagcgttatcaaagtgaggtccatggcttt
tacgcgaaggcgattcggcaacgctacccgttcaatgcccatgctggcggcgacgtcgcc
ctggatgatttccaggccttcttcaaaccgcgagggacgatggagcgcttctatgatggc
ttcctgcggcccttcgtcagtgccgagggtaaccgctatcgtttgcgcagtctggagggg
cacagtctgccggtgtcgcgttcgctgctggatcaactggccaaggcccagaccatccgc
caaggttttttcaccgaggaccagggggattgggccgttcggtttacgctggcgccctac
agcctggaccaggctgtcagccgggcgacgctgcgggtaggcgatcagcagttggaatac
cggcatggcccgattgtgccaatggcgttccgttggccgatcgacaccgataacggtcgc
ggcagcctgatactggaacgcggtgcagagcggccattgggcatcgaaaaagaccggggc
gcctggtcgctgttccggcttttcgagctgatgcaaaacgaggccgccagcggcagggac
gcgcagatactcaaggctgaccttgccggtttgcgtgccaattacctgctcaccagtcaa
cgcaaccccagcccgttccagatggcgacatggcggaccttccgcctgccggagcagctg
tga
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