Pseudomonas pergaminensis: KUA23_16850
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Entry
KUA23_16850 CDS
T08563
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KUA23_16850 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppeg02044
]
KUA23_16850 (tssK)
Secretion system [BR:
ppeg02044
]
Type VI secretion system
Imp/Vas secretion system core components
KUA23_16850 (tssK)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
DUF1254
Motif
Other DBs
NCBI-ProteinID:
USV98737
UniProt:
A0ABD7TAS6
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All DBs
Position
complement(3762285..3763613)
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AA seq
442 aa
AA seq
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MQTHNVIWQEGMLLRPQHLQHSDRYYHRQLNRTRLLNSDAWGFLTLEVDVQYLNLGKVVV
TQASGVLPDGSLFELSGAMEPLVLQVPANAGRQAVYLALPLATDNQVHVRRQEQSDVLAR
YVAYETEIGDTNAGVDSLCQVHCARPDLRLVLGEQPSDPSYVKLQVAQVLASTQEGGVRL
EADFVPTFLYLQGAGYVSSCVKEVISLLANRGEAIAARIQGSGASAGAQVGDFLMLQLIN
RAELILRHYLSQAQVRPEQVFRELLSILGELSTFASDNKRAQCSVHYQHGDQGASFRGLM
EGLRTLLSWVLEQHAIELTLQPRQYGVLVCPVNDLKLLGSATFILAATAQCDTEELRHRL
PSHLKIGPVERIRELVNLHLAGIKVKPLPVAPRQIPFHAGKTYFMLELSPRDIAQLEQSG
GFAFHASGEFAELQLNFWAIRN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacccacaacgttatctggcaagaaggcatgctgctcaggccccagcatttgcag
cacagcgatcgctactaccatcggcaactcaaccgcacgcgcctgctgaacagcgatgcc
tggggtttcctgaccctggaagtggacgtgcaatacctcaacctgggcaaggtggttgtc
acccaggccagcggtgtattacccgatggcagcctgttcgaactcagcggtgcgatggag
cccctggtgctacaggttcctgccaacgcaggcaggcaagcggtctacctggcgttgccg
ctggcgactgacaatcaggtgcacgtgcgcaggcaggagcaaagcgatgtccttgcgcgt
tacgtcgcttatgaaaccgagataggggacaccaatgccggtgtcgattccctgtgccag
gtccactgtgcacgcccggatttgcgcctggtgttgggcgagcagcccagtgatccgtcc
tacgtgaaactgcaggtcgcccaggtgttggcttcgacccaagaaggtggggtgcggctg
gaggcggatttcgtgccgacgtttctctatctgcaaggcgccggctatgtgtcgtcatgc
gtcaaggaagtgatcagcctgctggccaaccgtggcgaggcgattgccgcccgcatccag
ggcagtggtgcctctgccggggcacaggtcggtgattttctgatgctgcaattgatcaat
cgtgcggagttgattttgcgtcactacctgagccaggcgcaggtccgtccggagcaggtg
tttcgggagttgctgtcgattcttggcgagctgtcaacgttcgccagcgacaacaagcgc
gcgcaatgctcggtgcactaccagcacggtgatcaaggcgcgagcttccgtgggctgatg
gaggggcttcgcaccttgctttcatgggtgctggaacaacatgccattgaactgacgttg
caaccgcgccagtacggggtattggtctgcccggtgaacgatctcaagctactcggctcg
gccacgttcattctggcggccactgcccagtgcgatacagaggagctgcgccatcgcctg
ccatcacacctcaagatcggccccgttgagcgcatccgcgagctggtgaacctgcacctc
gccggcatcaaggtcaagccgctgccggtagcgccgaggcagattccgttccacgcgggc
aagacctatttcatgctcgaactcagtccccgcgacatcgcgcaactggagcagtcgggt
ggtttcgcctttcacgccagcggcgagtttgccgagctgcaactcaacttctgggctatc
aggaactga
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