Pseudomonas pergaminensis: KUA23_17360
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Entry
KUA23_17360 CDS
T08563
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppeg01002
]
KUA23_17360
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppeg01011
]
KUA23_17360
Peptidases and inhibitors [BR:
ppeg01002
]
Cysteine peptidases
Family C82
KUA23_17360
Peptidoglycan biosynthesis and degradation proteins [BR:
ppeg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KUA23_17360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
USV98834
LinkDB
All DBs
Position
complement(3871128..3872723)
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AA seq
531 aa
AA seq
DB search
MFKKHACYLSICLLVAPLVATADALPVEPLPVTTPAPVDLAPVQQALAQLPSVCPGLAPQ
IDAAAQLRLQAFYQQQGNVPLWSADERRQALQSQLLLLADDGLDPTHYSLPAADATANVL
CSDIDTSQHYLQALQDLHYGRLEQSRFEPLWHSQPPTRDPSIDVLAFAATGLQDMAQAFD
QARPSADLYRSLRNAYSTVRQQPLPHWDPVATGPLLRPGMEDPRVPELARRLISGGYLAK
APSGKQYRDDLVKAVKAFQLSHSLQADGVIGAGTVAELNISPAVRREQLRINLERFRWLA
QDLEPEGVLVNVAAAQLSVYQSGIPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTIPP
TIMREDKLPAIRLNPEYLRQQNLQVLDAEGHPLAPEQIDWARPGNILLRQEAGPRNPLGK
IVMRFPNPYSVYLHDTPSQPLFTKGPRAFSSGCVRVEQPLLLRDLLVSPAERARTDELLA
TGVTHEFRLATPVPVLLGYWTVEVDRQGGLVYAPDIYARDLVLMKAMGSVL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaaacacgcatgttacttgagcatttgcctgctcgttgcaccattggtcgcg
acagccgacgcgctgccggtcgagccgttgccggtcacaacgccggcgccggtcgatctg
gcgccggtccaacaggccctggcgcaactgcccagtgtctgccccggtctggcgccgcag
atcgacgccgccgcccaactgcgcctgcaagctttctaccaacagcagggtaatgtgccg
ttgtggtccgccgacgagcgtcgccaagccctgcaatctcagttgttgctgctggccgat
gacggcctggaccccacccactatagcctgcctgcggcggatgccacggccaacgtgctg
tgcagcgatatcgacaccagccagcactacctgcaagccctgcaggatttgcactacggg
cgcctggagcaatcgcgcttcgaaccgctgtggcattcccagccgccgacccgcgacccc
agcattgacgtgctggcctttgccgccacgggcctgcaagacatggcccaagcgttcgac
caggcccggcccagcgccgatttgtaccgcagcctgcgcaatgcctattccaccgtgcgc
cagcagccgttgccgcattgggacccggtcgccacgggcccgctgttgcgtcccggcatg
gaagacccgcgcgtcccggaactggcgcggcgcctgatcagtggcggctacctggccaag
gcgcccagcggcaagcaataccgcgacgacctggtcaaggcggtcaaggcgttccagctc
agccattcgctgcaggccgatggcgtgatcggcgccggtaccgtggccgaactcaacatc
agcccggccgtgcgtcgcgaacaactgcgcatcaaccttgagcgcttccgctggctggcc
caggacctggagcccgaaggtgtgctggtcaacgtcgccgccgcgcaattgagcgtgtac
cagagcggcattcccgtgtggcaaacccgcctgcaagtcggccgcgccgaacgccagacg
ccgctgctgaaatcgcgcatcacccggctgaccctcaacccgacctggaccatcccgccc
accatcatgcgcgaggataaactcccggcgatccgcctcaaccccgaatacctgcgccag
cagaacctgcaagtgctcgacgccgaaggccacccgctggcgccggaacagatcgactgg
gcgcgccccggcaatatcctgctgcgccaggaagccggcccccgcaacccgctgggcaag
atcgtgatgcgcttccccaacccgtactcggtgtacctgcacgacacgccgagccagcca
ctgttcaccaaggggccgcgggcattcagctcaggctgtgtcagggttgaacaacctttg
ttgctgcgggatctgctggtgagcccggccgaacgcgcccgcaccgatgaactgctggcc
accggcgtaacccatgaattcaggctggccacgccggtgccggtgctgctgggctactgg
acggtggaggtcgaccgccagggcggcttggtgtatgcgccggatatctacgcgcgcgat
ctggtgttgatgaaggcgatggggagtgtgctttga
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