Pseudomonas pergaminensis: KUA23_17405
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Entry
KUA23_17405 CDS
T08563
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KUA23_17405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppeg03021
]
KUA23_17405
Transcription machinery [BR:
ppeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KUA23_17405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
HTH_31
GerE
HTH_7
TnsD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
USV98843
LinkDB
All DBs
Position
complement(3880700..3881197)
Genome browser
AA seq
165 aa
AA seq
DB search
MSSPLHLPIQDLYCEHHGWLYRWLDRKLGNASDAADLAHDTFMRLLTRQPGAGFGSEPRA
LLTHIAKGLMIDSWRRQEVERAYLETIAHLPEQEVPSPETRWLILEALYRIEAMLRDLPE
KTRQAFLMSQIDGLTYAQIAEQLQVSLVSVKRYMRDAFLACLSVA
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccccctccatttgcctatccaggacctgtactgcgaacaccatggatggttg
taccgctggctcgaccgcaagctcggcaacgccagtgatgcggccgacctggcccacgac
accttcatgcgcctgctcacccgccagcccggcgccggtttcggcagcgagccgcgagcg
ttgctcacccatatcgccaagggcttgatgatcgacagttggcgccgccaggaagtcgaa
cgcgcctacctggagaccatcgcccacctgccggagcaggaagtgccgtcgccggaaacc
cgttggctgatcctggaggcgctgtaccgtatcgaagccatgctgcgcgacttgcccgaa
aagacccgccaagccttcctgatgtcacagatcgatggcctcacttacgcgcagatagcc
gagcaattgcaggtgtcgctggtgtcggtcaaacgctatatgcgcgatgcgttcctggca
tgcctgagcgtggcatga
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