Pseudomonas pergaminensis: KUA23_20310
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Entry
KUA23_20310 CDS
T08563
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppeg03016
]
KUA23_20310 (truA)
Enzymes [BR:
ppeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KUA23_20310 (truA)
Transfer RNA biogenesis [BR:
ppeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KUA23_20310 (truA)
Prokaryotic type
KUA23_20310 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
USW04032
LinkDB
All DBs
Position
complement(4515523..4516347)
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AA seq
274 aa
AA seq
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MAAAGFYRIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVSLMCAGRTDAG
VHACGQVVHFDTQAERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDAERMAEAAQHLVGVHDFSAFRAGQCQAKSPIKEVHHLR
VTRHGKMIVLDIRAGAFLHHMVRNIAGVLMTIGTGERPVEWAKEVLESRVRRTGGVTAHP
FGLYLVDVEYRDEFELPDRFIGPHFLTGFSELGG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaggcttttaccgcatcgccctgggcgtggaatacaaaggttcgcgctat
cgcggctggcagcgtcaggcgtctggcgtgctgacggtgcaggaaaccctggaaaatgcc
ctgtccaaagttgctgattcgccggtgtcgctgatgtgcgccgggcgcaccgatgcgggc
gtgcatgcttgcggccaggtggtgcatttcgacacccaggcagaacgctccatgaaggcc
tgggtgatgggcgctaatatcaatctgccccatgacgtcagtgtcagctgggccaaggtc
atgcccgcgcatttccacgcgcgcttcaaggccatcgcccggcgttatcgctatgtgatc
tacaacgaccagatccgcccggcgcacctcaacgaagaaatcacctggaaccatcgcccg
ctcgacgccgagcgcatggccgaagccgcgcagcacctggtgggcgtgcatgatttcagc
gccttccgtgccggccagtgccaggccaagtcgccgatcaaggaagtccatcacctgcgc
gtgacccgccacggcaagatgatcgtgctggatatccgcgccggggcgttcctgcaccat
atggttcgaaacattgccggggtgctgatgaccatcggcaccggcgagcgcccggtggag
tgggccaaggaagtgctggaaagccgggttcgccgtaccggcggggtcacggcgcatccg
ttcggcctatacctggtggatgtggagtaccgcgacgagttcgaactgccggatcgtttc
atcgggccacacttcctcacaggtttcagcgaacttggcggctga
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