Pseudomonas pergaminensis: KUA23_23340
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Entry
KUA23_23340 CDS
T08563
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_23340
DNA repair and recombination proteins [BR:
ppeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KUA23_23340
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
USV99929
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All DBs
Position
5162613..5163059
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AA seq
148 aa
AA seq
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MSADIVTHEQRSQNMSRIKGKNTKPEMIVRSACYELGLRYRLHRKDLPGTPDLVFSKHRL
CLFVHGCFWHRHPGCKYAYTPKSRLDFWLPKLAKNVERDTKARRALEAAGWRVSIIWECQ
TKNRDALRTEIQKMIDPELDSQRPTAEI
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagacatcgtcacacacgaacaacgctctcaaaacatgtccagaattaaagga
aaaaatacaaagcccgaaatgattgttcggtcggcgtgctatgagctggggcttcgctat
cgtctacaccgaaaggacctaccgggaacgccagacttggtattctcgaagcaccgatta
tgtttattcgttcacggctgtttctggcacaggcaccccggatgtaaatacgcatatacg
cccaaaagcagattagatttttggttacctaagctcgcaaaaaacgttgagagagatacg
aaggctcggcgagcacttgaagcagcaggttggcgtgtatcgatcatctgggaatgccag
acaaaaaacagagatgctttgcgaactgaaatccaaaaaatgatcgaccccgaactcgat
agtcagcgccccaccgctgaaatatga
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