Pseudomonas pergaminensis: KUA23_24170
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Entry
KUA23_24170 CDS
T08563
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg01501
beta-Lactam resistance
ppeg02020
Two-component system
Module
ppeg_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KUA23_24170
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KUA23_24170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppeg02000
]
KUA23_24170
01504 Antimicrobial resistance genes [BR:
ppeg01504
]
KUA23_24170
Transporters [BR:
ppeg02000
]
Other transporters
Pores ion channels [TC:
1
]
KUA23_24170
Antimicrobial resistance genes [BR:
ppeg01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
KUA23_24170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
mit_SMPDase
Motif
Other DBs
NCBI-ProteinID:
USW00089
LinkDB
All DBs
Position
5324412..5325710
Genome browser
AA seq
432 aa
AA seq
DB search
MRVMKWSMIALAVSAGTTQFAMASAQSDSKGFVEDSTFSINTRALYFSRDFRNEPLDGYE
KVNGKNKSRAEETGLGFNALYQSGFTQGTIGVGVDVIGLLGVKLDSGKGRAGTGLFPSGS
DGRSQDDYSKGGGAVKFRISDTVLKVGDQYTTAPVFASDDSRLLPELPQGISLTSNEIKG
LKLEGGHFTSSVAQNQTFRDSLGLTKTDFAGAVYSFTPEVTGSLYYAKTEDYFRKWYSNL
NWTHALSDDQSFALDFNIYDTKSDGEGKQRAYYDKTTKLDNRAFSLQGAYTIGAHTFTLA
AQKVTGDGDYGYGVDGGGSVFLANSIARSDFNGEGEKSYQARYDINMATFGIPGLSFMTR
YVTGSGAQTATTSNGKEWERDIEAKYVIQSGPAKDLSLRLRQATYRSGDGVYYGSPSIDE
LRLIANYPLNIL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgccctggctgtttcagcaggcactacgcagttc
gcaatggcgtccgcccaaagcgattccaaaggctttgttgaagacagcactttcagcatt
aatactcgcgccctgtacttcagccgcgacttccgcaatgagccactggatggctacgag
aaagtcaacggcaagaataaaagccgtgctgaagagactggcctgggcttcaacgccctg
taccaatcgggcttcacccaaggcaccatcggcgtcggtgtagacgtgatcggcctgctg
ggcgtcaagctcgacagcggtaagggccgtgccggcactggtctgttcccgtccggttcc
gacggtcgctcgcaggacgattactccaaaggcggcggtgccgttaaattccgcatctcc
gatacggtcttgaaagtcggcgaccaatacaccaccgctcctgtgtttgcctccgatgac
agccgtttgctgccagagctgccacaaggtatctcgctcaccagcaacgagatcaagggc
ctcaaactggaaggtggtcacttcacttccagcgtcgcacagaaccagaccttccgtgac
agcctgggcctgacgaagaccgactttgccggtgccgtctactccttcaccccagaggtt
accggcagcctgtactacgcaaaaaccgaagattacttccgcaagtggtacagcaacctt
aactggacccacgcgctgagcgacgaccagtccttcgccctggacttcaacatctacgac
acgaaaagtgacggtgaaggcaagcaacgcgcctactacgacaaaaccaccaagcttgat
aaccgtgcgttcagcctgcagggtgcgtacaccattggtgctcacaccttcacactggct
gcccagaaagtcaccggtgacggcgattacggttacggcgtagacggcggcggctcagtg
ttcctggccaactccattgcccgctccgacttcaacggcgaaggcgagaagtcctaccag
gctcgttacgacatcaacatggcgacctttggcattcctggcctgagcttcatgactcgc
tacgtaaccggtagcggcgctcaaaccgccacgacctcgaacggcaaagagtgggaacgt
gacatcgaagccaagtacgtgatccagagcggtccagccaaggacctgagcctgcgtctg
cgtcaagcaacctatcgttcgggtgatggcgtttactacggttcgccttcgatcgacgaa
ctgcgtttgatcgcgaactacccgctgaacatcctgtaa
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