Pseudomonas pergaminensis: KUA23_24525
Help
Entry
KUA23_24525 CDS
T08563
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg03410
Base excision repair
ppeg03430
Mismatch repair
ppeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KUA23_24525 (recJ)
03430 Mismatch repair
KUA23_24525 (recJ)
03440 Homologous recombination
KUA23_24525 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_24525 (recJ)
DNA repair and recombination proteins [BR:
ppeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KUA23_24525 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KUA23_24525 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KUA23_24525 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
USW00154
UniProt:
A0ABD7TER2
LinkDB
All DBs
Position
complement(5407945..5409654)
Genome browser
AA seq
569 aa
AA seq
DB search
MRIDPRPLPAVLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQRNPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGDELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYESKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARSGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTTDVAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALAVVASQHPNLIAKYGG
HAMAAGLTLREENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPVFHGVFQLVEQRVVGERHLKVVLKTECGSVKLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgatcctcgcccgttgcccgctgtcctgccgtttctcggtgaattgccaccg
ctgttgacccgtctctacgccgcgcgcggggtgcagtccgaggccgagctggataaaagc
ctggcgcggttgattccctatcagcagctcaagggcatcgacgcggcggtggacttgctg
gtgaccgcgttggagcagcgccagcgcatcctcatcgtcggcgacttcgacgccgacggc
gccactgccagcaccgtgggcaccttgggcttgcgcctgctcggtgcggcgcatgtcgac
tacctggtgcccaaccgcttcgaatacggctatggcctgaccccggagatcgtcgccgtt
gcgctgcagcgcaatccccaactgctgattaccgtggacaacggtatctccagcgtcgaa
ggcgtggcggcggcgaaagcggcggggctgcaagtgctggtgaccgaccaccacttgccc
ggcgatgagttgccggcagcggacgccatcgtcaacccgaaccagccgggctgtgaattc
ccgagcaaggccctggcgggtgtgggcgtgatcttctacgtgctgatggccctgcgcgcg
cgcctgcgcagcctgggctggtacgaaagcaagccacaacccaacatcggcgagttgctc
gacctggttgccctgggcagcgtcgccgacgtggtgcccctggacgccaacaaccgcatc
ctcgtgcatcaaggcctggagcgtatccgcgctggccgtgcgcggtcggggatcaaggcg
atcctggaagtggccaagcgcgacgcggcacgcatcacttccactgacctgggctttatc
ctcggcccgcgcctgaatgccgccgggcgcctggatgacatgagcctggggatcgaatgc
ctgctgaccaccgacgttgccgctgcccgtgaaatggccgcgcaactggatggcatgaat
caggaccgtaaatccatcgaacaagggatgcagcgcgaggccttggcccagctcaaggac
ctgccggtggagtcgatgccctatggcttgtgcctgttcgacccggaatggcaccaaggt
gtgatcggcattctggcgtcgcggatgaaggagcggtatttccgaccgaccatcgccttt
gccgacgccggtgatggcctgttgaagggctcagggcgctctgtgcagggttttcatatc
cgtgacgccctggcggtggtcgcgagccagcatcccaacctgatcgccaaatacggcggc
cacgccatggcggctggcctgacactgcgcgaggaaaacttcccactgtttgccgaagcg
tttgacgctgaagtgcgccggcaactgcgtgaggaagacctgaccggacgcttgttgtcg
gacggcactctggcggtggaagagtttcacttggaactggcccgcgcgttgcgacatgcc
gggccgtggggtcagcactttcccgagccggtctttcacggcgtattccagttggtagag
cagcgcgtggtgggtgagcggcacctgaaggtggtgctcaagactgaatgcgggtcagtg
aaactcgatggcattgcctttggcgtggaccgtgaggtctggccgaacccgaccgtgcgt
tgggtggagttggcgtacaagctggatgtgaacgagtttcgtgggaatgagacggtgcaa
ctgatgattgcccacatcgaaccgcgctga
DBGET
integrated database retrieval system
