Pseudomonas pergaminensis: KUA23_25585
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Entry
KUA23_25585 CDS
T08563
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUA23_25585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppeg03019
]
KUA23_25585
Enzymes [BR:
ppeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KUA23_25585
Messenger RNA biogenesis [BR:
ppeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KUA23_25585
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
USW00349
UniProt:
A0ABD7TFA6
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All DBs
Position
5637199..5638602
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AA seq
467 aa
AA seq
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MLKKLFQSFRSPLRRTQHKRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAG
HPQNDEEEDTNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNNLIRLIGDPVQRYQEDPVRMLRAVRFAAKLNFGIEKHTAAPIRDLAPMLREIPSA
RLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPKRVLRLQERGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERRDMIRDLGSKGDGAGEGPKKRRRSGAKRKRSAADASGAAGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttctcccttgcgtcgtacgcaacacaaacgc
agcacgcctgaagtgctcaatagcagccagcattcgctgcaacgcgctcaattcagccgt
tatgcagtgaacatcgtcgaacgtttgcagaacgccggctaccaggcttatctggtgggc
gggtgcgtacgcgacatgttgctcaatatcacgcccaaggacttcgacgtcgccaccagc
gccacacccgagcaggtacgcgctgaattccgcaacgcgcggatcatcggccggcgcttc
aagttggtgcatatccacttcggtcgcgaaatcatcgaagtcgcgacgttccgcgcaggc
cacccgcaaaacgatgaagaggaagacactaaccagtcctcccgcaacgaaagcgggcgc
attttgcgcgacaacgtctacggcaccctggaagaagacgcgcagcgccgcgacttcacc
atcaacgccctctattacgatccggtcagcgagcgcatcctcgattacgccaatggcgta
cacgatatccgcaataacctgatccgcctgatcggcgacccggtccagcgctaccaggaa
gacccggtgcgcatgctgcgggccgtgcgtttcgccgccaagctgaacttcggcatcgag
aaacacaccgctgcgccaattcgcgacctggcaccgatgctgcgggaaattccctcggca
cgcctgttcgaagaagtgctcaagctgttcctctcgggctacgccgccgacacctttgaa
atgctggtggacctgcagctattcgatccactgttcccggccagcgccgaggccttggaa
tacaacccgacgtacacccacaccttgatcagcgaagcgttgatcaacaccgacctgcgc
atcaagcagaacaagccggttaccccggcgttcctgtttgctgccctgttgtggccagcc
ctgccaaaacgtgtactgcgcttgcaggaacgtggcatgccgccgatcccggccatgcag
gaagccgcgcatgagctgatcgccgaacagtgccagcgcatcgctattccgaaacgcttc
actatgccgatccgcgagatctgggacatgcaggagcgtctgccacgccgcagcggcaaa
cgcgccgacctgttgctggacaacccgcgtttccgcgccggctatgacttcctgctgctg
cgtgagagcgccggtgagcagactgatggcctgggcgaatggtggaccgactaccaggac
gccaacgacagcgagcgccgcgatatgatccgcgacctcggcagcaagggcgatggcgcc
ggcgaaggcccgaagaagcgccgtcgcagcggtgccaagcgcaagcgcagcgccgctgat
gcctcgggcgcagcaggcgaataa
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