Pseudomonas pergaminensis: KUA23_25660
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Entry
KUA23_25660 CDS
T08563
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppeg03021
]
KUA23_25660 (nusA)
03009 Ribosome biogenesis [BR:
ppeg03009
]
KUA23_25660 (nusA)
Transcription machinery [BR:
ppeg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KUA23_25660 (nusA)
Ribosome biogenesis [BR:
ppeg03009
]
Prokaryotic type
rRNA transcription factors
KUA23_25660 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
DUF507
DUF2187
Motif
Other DBs
NCBI-ProteinID:
USW00364
LinkDB
All DBs
Position
complement(5657908..5659389)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR
RWTVVEEADLDDPAIETWPSKVAETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIEELEVDEDLAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDTVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggcgtaccggca
aacgtgatttttgaagcgctggagctggccctggccactgctaccaaaaagcgttttgaa
gacgaagttgatctgcgtgtggaaatcaaccgccacaccggtgcctatgagactttccgt
cgctggacggtcgttgaagaagccgatcttgatgatccggccatcgaaacctggccaagc
aaggttgccgaaacgcatcctggcgccaaggtcggtgatgtcgtcgaagaaaagatcgaa
tcgatcgaattcggccgtatcgctgcacagaccgccaagcaggtcatcgtgcagaaggtt
cgcgaagccgagcgcgctcaagtcgttgacgcctatcgcgagcgcctgggtgaaatcatc
tccggcaccgtgaaaaaagtcacccgcgacaacgtgatcgtcgacctgggcaacaacgcc
gaagcgttgctggcccgcgaagacatcatctctcgcgaaaccttccgtgtcggcgtgcgc
ttgcgtgcgttgctcaaggaaatccgcaccgagaaccgcggccctcagttgatcctgtcg
cgtaccgcgccggaaatgctgatcgagctgttccgtatcgaagtgccggaaatcgccgaa
ggcctgatcgaagtcatggctgcgtcccgcgacccgggttcgcgtgccaagatcgcggtc
cggtccaaggacaaacgcatcgacccgcaaggcgcttgcatcggtatgcgcggttcgcgc
gtccaggcagtgtcgggtgaattgggcggtgagcgtgtggacatcgtcctgtgggacgat
aacccggcgcagttcgtgatcaacgccatgtcgccggctgaagtggcggcaattatcgtt
gacgaagatgcccatgcaatggacatcgccgttggcgcagacaatctggctcaggccatt
ggtcgtggtggtcagaacgtgcgtctggccagccaactgaccggttggaccctgaacgtg
atgaccgaatcggacatccaggctaagcagcaagctgaaaccggtgacatcctgcgcaac
ttcatcgaagagttggaagtcgatgaagacctggcgcaggtgctggtagatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacaccgtcaacgagcttcgcgctcgggccaaggatcgtttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgatctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccattggttcgagtaa
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