Pseudomonas pergaminensis: KUA23_25980
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Entry
KUA23_25980 CDS
T08563
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg00260
Glycine, serine and threonine metabolism
ppeg00460
Cyanoamino acid metabolism
ppeg00630
Glyoxylate and dicarboxylate metabolism
ppeg00670
One carbon pool by folate
ppeg00680
Methane metabolism
ppeg01100
Metabolic pathways
ppeg01110
Biosynthesis of secondary metabolites
ppeg01120
Microbial metabolism in diverse environments
ppeg01200
Carbon metabolism
ppeg01230
Biosynthesis of amino acids
ppeg01240
Biosynthesis of cofactors
ppeg04981
Folate transport and metabolism
Module
ppeg_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KUA23_25980 (glyA)
09102 Energy metabolism
00680 Methane metabolism
KUA23_25980 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KUA23_25980 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KUA23_25980 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KUA23_25980 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KUA23_25980 (glyA)
Enzymes [BR:
ppeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KUA23_25980 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
USW00420
UniProt:
A0ABD7TFF3
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All DBs
Position
5733012..5734265
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAQTMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctcttcgccgccatggag
caagaagccgtgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaggctcaaggttcggttctgaccaacaagtacgccgaaggctaccca
ggcaagcgctattacggtggttgcgaatacgtcgacgtggttgagcaactggccatcgac
cgtgcaaaggaactgttcggcgccgattacgccaacgtccagccgcacgccggctcccaa
gccaacagcgccgtgtacctggccctgctgcaaggtggcgacaccatcctgggcatgagc
ctggcccacggcggtcacttgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgattacgacgaagtcgagcgc
ctggcggttgaacacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctggacttcccacgtttccgcgcaatcgctgacaaagtgggcgcgtacctgttcgtcgac
atggctcacgtggccggtctggtcgccgctggcgtctacccgaacccggtgccttacgct
gacgtcgtgaccaccacgacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gcgcgcgccaacgctgacatcgagaagaagctgaactccgctgtattcccaggcgcccag
ggtggcccgctggagcacgtgatcgccgccaaagcgatctgcttcaaggaagccctgcag
cctgagttcaagacttaccagcaacaagtggtgaaaaacgcccagaccatggccagcgtg
ttcatcgagcgcggttttgacgtggtgtccggcggtactgagaaccacctgttcctgctg
tcgctgatcaagcaggacatttccggtaaagatgctgatgctgccctgggcaaagccttc
atcaccgtgaacaaaaactccgtgccgaacgacccacgttcgccgttcgtcacctcgggc
ctgcgctttggcaccccggcggtgaccactcgcggcttcaaggaagcagagtgcaaggaa
ctggcaggctggatctgcgacatcctggcagacctgaacaacgaagccgtgatcgacgcg
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtgtacggcgcttga
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