Pseudomonas pergaminensis: KUA23_26320
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Entry
KUA23_26320 CDS
T08563
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppeg03016
]
KUA23_26320 (miaB)
Enzymes [BR:
ppeg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
KUA23_26320 (miaB)
Transfer RNA biogenesis [BR:
ppeg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
KUA23_26320 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
USW00484
UniProt:
A0ABD7TFN7
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All DBs
Position
5810342..5811670
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARF
TKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLSEIIHLAENGVREVTLLGQNVNGYRGLTDDGRLADLAELIRVVAAVDGIERIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFEQTMKLIEDVGFDFSYSFVYSQRPGTPAADLADDTPEALKKE
RLNALQHRLNQQGFEISRQMVGSTQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVHIDAAQPHSLRGSLIP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgctgggcgaacaccaggccctggaagtcaccgcccgcgccgaagat
gccgacgtgatcctgctcaatacctgctcgatccgcgaacgggcccaggaccgtgtgtac
tcgcagctgggccgctggcgcgaattgaaactggccaacccggacatggtgatcgccgtc
ggcggttgcgtggccagccaggaaggcgccgcgatccgcgaccgcgcgccctatgtcgac
gtggtcttcggcccgcagaccctgcaccgcttgccggaaatgatcgacgccgcacgcttc
accaagctgccgcaggtcgacgtgtcgttcccggaaatcgaaaaattcgaccacttgccc
gagccacgtatcgatgggccaagtgcctacgtgtcggtcatggaaggctgcagcaagtac
tgcaccttctgcgtggtgccttacacccgtggcgaagaagtcagtcggccgtttgacgac
gtactgtcggaaatcatccacctggccgaaaacggcgtgcgcgaagtgaccctgctgggc
cagaacgtcaacggttaccgtggcctcaccgacgatggccgcctggccgacctggcggag
ctgatccgcgtggtggctgccgtggacggtatcgagcggattcgctacaccacctcgcac
ccgctggagttctccgacagcctgatccaggcccacgcggaagtgccggaactggtcaag
cacctgcacctgccggtgcaatcgggttcggaccgcatcctggcggccatgaagcgcaac
cacaccgccctggaatacaaatccaaactgcgcaaattgcgcgcggcggtgccgggcatc
tgcatcagttcggactttatcgtcggcttccccggtgaaaccgaaaaagacttcgagcag
accatgaagttgatcgaggacgtcggtttcgacttctcttattcattcgtctacagccag
cgccccggcaccccggccgccgacctggcggatgacaccccggaagcgctgaaaaaagag
cgtctcaatgccctgcaacatcgcttgaaccagcagggtttcgagatcagccgacaaatg
gtcggttccacccagcgcatcctggtcaccgactactcgaaaaaagacccgggcgagctg
cagggccgtaccgaaaacaaccgaatcgtaaacttccgttgcgataatccgaccctgatc
ggccagtttgccgacgtgcacatcgatgcggcgcagcctcattcgttgcgtgggtcgttg
atcccgtaa
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