Pseudomonas pergaminensis: KUA23_26510
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Entry
KUA23_26510 CDS
T08563
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppeg03000
]
KUA23_26510
Transcription factors [BR:
ppeg03000
]
Prokaryotic type
Helix-turn-helix
Other families
KUA23_26510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PAS_4
HTH_50
PAS_9
AAA_2
HTH_30
HTH_23
HTH_7
HTH_28
PAS_8
AAA
TIP39
HTH_22
Enkurin
Mga
Diguanyl_cycl_sensor
AAA_16
RWP-RK
HVO_A0261_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
USW00519
UniProt:
A0ABD7TFN5
LinkDB
All DBs
Position
complement(5850970..5852859)
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AA seq
629 aa
AA seq
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MHNDHFSRHAQQVLTVAHGRDPSSDPSIARSWLRCLEDYHLDPAQTIAPTVLEHGRLLES
RERLQQVLHIAGSEMNSLHQQLSGAGHAVLLTDSRGVILNCVTAPSERKIFERAGLWLGA
DWSEACEGTNGIGTCLVERQSLTIHRDEHFRGRHTGLTCSASPVFDPHGDLLAVLDVSSA
REAVSRQSQFHTMALVNLSAKMIESCYFLRHFENHWLLRFHLQAESVGLFSEGLLAFDGE
GRICAVNQSAMNLLGQLRGGLLGQPVEAFFDCSLDQLLGRASANATASWPLRTRDGRPLF
AALRGQSRSVPAPMAKPVPPQLSGICLGDPALQNDFRKALRVFERDVPLLINGETGSGKE
AFAKAVHRASQRTDKAFVALNCAAIPESLIESELFGYRGGSFTGALKDGMRGKLQQADGG
TLFLDEIGDMPLALQTRLLRVLEDRLVVPIGGEPQAVDVRVISATHRNLHERVRDGSFRE
DLYYRLNGLEIGLPALRERSDKSQLLDFLLGEEAGEQPVSVEPAAREALLAFAWPGNVRQ
LRTVLRTLVALSDDGRIGLLDLPAMVQCPPVQHASESPLDDAERQTLLTALEQRHWHMTY
TAQALGISRNTLYRKLRKYKIKRPVAVSS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgatcatttcagtcgccatgcccagcaagtcctcaccgtggcccatggtcgc
gatccatccagcgatccctccatcgcccgctcctggctgcgttgtctggaggactatcac
ctcgaccctgcgcaaaccattgcccccaccgtgctggaacacgggcgcctgctggaaagc
cgcgagcgcctgcaacaggtgctgcatatcgccggcagtgagatgaacagcctgcaccag
cagctctcgggcgctggccatgcggtgttgctgaccgattcgcggggcgtgatcctcaac
tgtgtcaccgcgccgtccgagcgcaagatcttcgaacgcgccgggctgtggctgggcgcc
gattggagcgaggcgtgcgaaggcaccaacggcatcggcacctgcctggtggagcgccag
tccctgaccattcaccgtgatgagcattttcgtggccggcacaccgggctgacctgttcg
gccagcccggtgttcgacccccatggtgatttgctggcggtgctggatgtgtcatccgca
cgggaggcggtgtcgcgtcagagccagtttcacaccatggcgctggtcaatctgtcggcg
aagatgatcgagagttgttacttcctgcggcattttgaaaaccactggttgctgcgtttt
catttgcaggccgagtcggtggggttgttcagcgaagggctgttggcgttcgacggtgaa
ggccggatctgcgcggtcaaccagagcgcgatgaacctgctggggcaactgcgcggcggt
ttgctggggcaaccggtggaagcgtttttcgattgctccctggaccaactgctcggtcga
gccagcgccaatgccacggccagttggccgctgcgcacccgtgatggacggccactgttc
gccgcactgcgcggtcagtctcgcagcgtgcctgcccccatggccaagccggtgccgcct
cagttgtccggcatttgcctgggcgatccggcgctgcaaaatgactttcgcaaagcgctg
cgggtgtttgagcgtgatgtgccactgctcatcaatggcgaaaccggctccggtaaagaa
gccttcgccaaggccgtgcaccgtgccagtcagcgcaccgataaagcgtttgtagcgctc
aattgcgccgccattccggaaagcctgattgaaagcgagttattcggctatcgtggcggc
agtttcactggtgccctcaaggatggcatgcgcggtaagctccaacaggccgacggtggc
actctcttccttgacgaaatcggcgatatgccactggctttgcagacccgtctattaagg
gtgctggaggatcgcctggtggtccccatcgggggcgagcctcaagccgtggatgtccgg
gttatcagcgccacgcaccgtaatttgcatgagcgcgtgcgggacggcagcttccgcgaa
gacctgtattaccgtcttaacggcctggaaatcggcttgccggcgttacgcgagcgcagt
gacaagtcgcaactgctggacttcctcctgggggaggaggccggtgagcaaccggtcagt
gtggagcccgcagcgcgcgaggcattgctggccttcgcctggccgggcaatgttcgtcag
ttgcgcacggtattgcgcacactggtggcactcagcgatgacggacggatagggttgttg
gatctgcccgctatggtgcaatgcccccctgttcaacacgccagcgagtcacccctcgat
gatgccgaacgacagacgttgctgacggcattagagcaacggcactggcatatgacgtac
acggcgcaagcgctgggtataagtcgtaatacgctttataggaaattgcgcaagtataaa
atcaaacggcctgtggcggtatccagttaa
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