Pseudomonas pergaminensis: KUA23_29090
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Entry
KUA23_29090 CDS
T08563
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg00300
Lysine biosynthesis
ppeg00470
D-Amino acid metabolism
ppeg01100
Metabolic pathways
ppeg01110
Biosynthesis of secondary metabolites
ppeg01120
Microbial metabolism in diverse environments
ppeg01230
Biosynthesis of amino acids
Module
ppeg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KUA23_29090 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KUA23_29090 (lysA)
Enzymes [BR:
ppeg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KUA23_29090 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
USW01006
UniProt:
A0ABD7THV1
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Position
6381163..6382410
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRDSEARAYDIVGPICETGDFLAKDRQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
attgccgagcgctttggcacgccgacctatgtgtattcccgtgcgcatatcgaagcccag
taccgctcgttcaccgacgcgctcgacggcgtaccgcacctggtgtgctacgcggtcaag
gccaactccaacctgggcgtcctgaatgtcctggcacgcctcggcgctggtttcgacatc
gtttcccgtggcgagctggagcgtgtactggctgccggcggcaaggctgaaaagatcgtc
ttctccggcgtcggcaagacccgcgaagacatgcgccgcgccctggaagtcggcgtgcat
tgcttcaacatcgaatccaccgacgaactcgagcgcctgcaagtcgtggccgccgagatg
ggcgttcgcgcgcctatctccctgcgcgtcaacccggacgtcgacgccggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccatcgccgacgccgaagac
gtgtacatccgcgctgcccaactgccaaacctggaagtgctgggcgtcgactgccacatc
ggctcgcaactgaccagcctgcctccgttcctggacgcgctcgaccgcctgttggcactg
atcgatcgtctcggcgaatgcggcatttacctgcaccacatcgacctgggtggtggcgtg
ggcgtgcgctatcgcgacgaagagccgccgctgattgccgactatatccaagccgtgcgc
gagcgcatcgaaggccgtgacctgacgctgatgttcgagccgggccgctatatcgtcgcc
aacgcgggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggacttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aatgtcaccgccgtgacgcctcgcgacagcgaagcccgcgcctacgacatcgtcggcccg
atctgcgagaccggcgacttcctggccaaggatcgtcagttggccctggaagaaggcgat
ctgctggctgtgcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcggacgtaccgccgaggtgctggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
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