Pseudomonas pergaminensis: KUA23_29430
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Entry
KUA23_29430 CDS
T08563
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KUA23_29430 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppeg02044
]
KUA23_29430 (tssK)
Secretion system [BR:
ppeg02044
]
Type VI secretion system
Imp/Vas secretion system core components
KUA23_29430 (tssK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
USW01072
UniProt:
A0ABD7THG5
LinkDB
All DBs
Position
complement(6455669..6457003)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKL
AIVSARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVEEGEALE
AARYVSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGISDYAAIGLVRIKEKRADRAL
VLDDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLALSFAP
VMAALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLLDNASFILVVRADVPGETLRA
RFGQQSKVGSVEHIRDLVNLQLPGITLLPLPVAPRQLPYHAGSTYYELDRGSEAWQQLGN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcggaacgcagcacttc
cagcagcatgaccgttacctggaaaacctgatcgacgcccgtagccgtccgttatccgcc
ggcgcctggggtttttccgagttgctgatcgaccagggcctgctggcccagggcaagctg
gcaatcgtgtcggcacgcggcctgctgccagacggtacgccgttcaacatcccccaggac
gacctggcgccgagcccgctaaacattgacgacaacctgcgcgacggcctggtgtacctg
gccctgccgctcaagcgtgccggcgcccgcgataccgtggaggaaggcgaagccctggaa
gccgcgcgttacgtgagccaggtccgtgaagtgcgtgacgacaacgcaccgttcgaaaac
cgcgctccggtggccgtgggctcccgcgccctgcgcctgctgaccgcccaggatggcatc
agcgattacgccgccatcggcctggtacgcatcaaggaaaagcgcgccgaccgtgcgctg
gtgctcgacgacacctacattccgccggtcctggacgtcgccgcgagcaagccgctgacc
gcgttccgcagtgaattgctcggcttgctgcaccagcgtggcgaagccctggcggggcgg
gtagtcgcgtcaggcgccggtggcgcgtcggagattgccgacttcatgctgctgcaactg
gtcaaccgtgcccaaccgctgatccagcatttgagccagttgagcccgctgcacccggag
cgcttcttcagtgaattggtgagcttggccggtgagttctcgaccttctcgacctcgggc
cgccgtccccaggaatacccgcaataccagcacgacgacctggccctgagctttgccccg
gtgatggccgcgctgcgtgaagcgctgtcgatgctgatcgacagcaaggccacgccaatc
ccgattgtggagaaagcctacggcgtgcacgtggcgatgctggccgacaagaccctgctc
gacaacgccagtttcatcctggtggtgcgtgccgatgtccccggcgaaaccctgcgcgca
cgcttcggccagcagagcaaggttggttcggtggagcacatccgcgacctggtcaacctg
caactgccgggcatcaccctgttgcctctgcccgtggcgccgcgccaattgccgtaccac
gcaggctcgacctattacgagctggatcgcggcagcgaggcttggcaacagctgggcaac
tccggtggcttcgccttccatatcgccgggcagttcccgggcttgaacctggccttctgg
gcgatccgaggataa
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