Pseudomonas pergaminensis: KUA23_29495
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Entry
KUA23_29495 CDS
T08563
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
ppeg
Pseudomonas pergaminensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
AHH
RHS
PAAR_motif
DUF6882
Motif
Other DBs
NCBI-ProteinID:
USW01085
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All DBs
Position
6471754..6476178
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AA seq
1474 aa
AA seq
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MSDALWAARMGDALTHTSMMADILGGVLEVAANVAITALATAAVAAAVGVTIATAGIGGC
ILGAVVGIVVGMAMSKTGADKGLSKMCESFANALFPPVVEATIAVGSTDTFVNSIPAARA
AGSIPSHVAPAGTELEQAPPEPDPEPKPEPGFLDMAEGFFSQLWRPTVATPAPGVVPALT
DMVLCARHPPMPPQLLAEGSDKVTINGQPAVRSGDRSMCEATVVSSGLISPNVTIGGGTV
VVQEIRSGKTPGVGLAIEALMMLKGAKGKTLSNLPCMLLGGVSSFAVSQAIGAMTNAAMS
SLNPVHTATGAKILGGTNELDFVLPGALPMAWQRVYNSHDIRTAGLFGAGWSVAYEVSVE
ILMHPEGGEELIYTDEQGRRINLGSLVPGSAMFSPAEVLSFRRHHNGQLLIESDDGLYRL
FDLTPGSTTHLRLSQLGDRNDNRIFVGYHENGRIARLRDTSNQVQVELVYDQDRLERIER
LYADQPREVLVSYRYNAIGELAQVSNASGEVQRRFAYDAGRRMIEHQLPTGLRCFYEWGH
IDNTEWRVVRHWTDEGDAYQFEYDLQKGITRVTDSLQRVSTRQWNAQHQIIAFTDNLDKT
WLFEWNDERQLLSATDPQGGRYEYSYDESGNLTAETDPLGRSVSTLWLEHWSLPRTQTDA
AGNTWQYRYDQRGNCVAETDPLGHMTRYRYNAQGLVVEVIDATGKSKQLKWNTLGQLTDH
LDCSGFPTRFGYDPHGYLQVITNAMGERTQFQHDRQGRLISKQFPDGRTEYFQRDSAGLL
LGHTDPAGHTTLYQHNRRGQVCQRTDAQGRQVSLGYDTFGRLQSLSNENGERYRFTWDAC
DRMIQQQGLDGGTKSYAYDGLDNLIRVTSTPAPYGTGLAIVSQAPEAPIIHQLERDAVGR
LIAKVTDDGRTEYQYDPLNQLSAVTFKDASGAEQSLGFAYNALGQLLEEHSASGSLHHRY
DELGNLIQTQVPDGRWLNRLYYGSGHLHQINLDGDVISDFERDRLHREVLRTQGQLSTRS
DYDPVGRLRARIRRHDSQPALLSPDMQRQFEYDPADNLIGKLDQRPSARHQQLFHYDATD
RLIASQDSLYGARETFAYDAAANLLDSVNPSQGKVLHNRLVSFQDKRYRYDGFGRVIEKR
SGRYGVQRFSYDAESRLVEVRNEKGHVVRMVYDALDRRIKKTEQDRNGYTLSQVSFIWDG
LRLLSETQNERSSLYVYLNQGHEPLARVDGLGVHKKTRYYHNDLNGLPEQLTESDGNIVW
KAIYQVWGNTVSEEREPYYLEDQNIRFQGQYLDRETGLHYNTFRFYDPDIGRFTTEDPVG
LLGGINLYQYATNPLGWSDPLGWCSTKLGKNMGARKGDGMANHHLIPEELIKHKEFGKMF
SRLKKIGWDPDGASNGAFLPGSKDLAAKTQLPGHWSNHNKYTDAVRDRLRSLNKQQAGLS
DMDLALEVSNIQKWASGGLQNGLFKTDAVTGRLL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgttatgggcggcccggatgggcgatgcactgacccacacctcgatgatg
gcggatatcctcggcggcgtgctggaggtggcggccaacgtggcgatcacggcactggcg
actgccgcagtcgcggccgccgtgggggtgacgattgctaccgccggtatcggcggctgc
atcctcggcgctgtggtgggcattgtcgtcggcatggccatgagcaagacgggggccgac
aagggcctcagtaagatgtgcgagagtttcgccaatgcgctgtttccaccggtggtggaa
gccacgattgcggtgggttcgaccgacacgttcgtcaacagcattccggctgcgcgggcc
gcgggctccattccttcgcacgtggcgcccgctggtacggagcttgagcaagcgccgccg
gagcccgaccccgagccaaaacccgagcctggcttcctggacatggccgagggtttcttc
tcccagctatggcggcccaccgtcgccacgcctgcaccgggtgtggtgccggccctcacc
gacatggtcctgtgcgcccgccatccgcccatgccgccacagcttctggccgaagggtct
gacaaagtcaccatcaacggccagcccgccgtgcgcagcggtgatcgcagcatgtgcgag
gcgacggtggtgtcgtcggggctgatctcgccaaacgtcaccattggtggtgggacagtg
gtggtgcaggaaattcgcagtgggaagacccccggcgttggcttggcgattgaagcattg
atgatgcttaaaggagccaagggcaagacgctgagtaatttgccgtgcatgttgttgggc
ggtgtcagctcctttgccgtgagccaggccatcggcgccatgacaaacgccgccatgtct
tcacttaaccccgtgcataccgcgacaggcgccaaaatactgggcggcacgaatgagttg
gattttgtactgccaggtgcgttgcccatggcctggcagcgcgtctataacagccacgat
atacgcacagcagggctcttcggcgcgggctggagcgttgcctatgaggtgagtgtcgaa
atcctgatgcatcctgaaggcggcgaggagctgatctatacagatgagcaagggcggcgt
atcaacctgggctcgcttgtgccaggcagcgcaatgttcagccctgcagaagtactgagc
ttcaggcgccatcacaacggtcagttattgatcgagagcgatgatgggttgtatcgcctc
ttcgatctcacaccaggttcgaccacgcaccttcggttgagtcagttgggggatcgcaat
gacaatcggattttcgtcggttaccacgagaacggccgcattgcgcgcctgcgggacaca
tcgaaccaggtccaggttgagctggtttacgaccaggatcgcctggagcgaatcgaacgc
ctgtacgccgaccagccgcgtgaggttctcgtcagctaccgctacaacgcgataggtgaa
ttggcgcaagtaagcaacgcgtccggcgaggttcagcgacgctttgcctacgacgccggt
cgcaggatgattgaacaccaactccctaccggtctgcgctgcttttatgagtgggggcac
atcgacaacactgaatggcgagtagtacgacactggaccgacgagggcgacgcctaccaa
ttcgagtatgacttgcaaaagggcatcacacgcgtcacagacagcctgcaacgtgtcagt
actcgtcagtggaatgcccagcatcagataatcgcattcaccgacaatctggataaaacc
tggctattcgagtggaacgacgagcgtcagttactgagcgctacggaccctcaagggggg
cgctacgaatacagctacgatgagtccggcaacctgacggctgagacggatccactcggg
cgtagcgtatccacgctttggctggagcattggtcgctgccacgcacacaaaccgacgcc
gccggtaacacttggcagtatcgctatgatcaacgcggtaattgtgtcgccgagaccgac
ccgctgggccatatgacccgttatcgctataacgcacaaggcctggtggtggaggtcata
gatgcaaccggcaaaagcaaacagttgaaatggaacacgctcgggcaactgaccgaccac
ttggattgctcgggattcccgactcgctttggctatgaccctcacgggtacttgcaggtg
attaccaatgcaatgggcgaacgcacgcagttccagcatgaccgccagggtcggctgatc
agcaagcaatttccggacggtcgaaccgaatatttccagcgcgacagtgccggcctactg
ctgggtcatacagaccctgcggggcacacgactctttaccagcacaatcgcaggggccag
gtctgccaacgtacggatgcacagggtcgccaggttagcctgggctatgacacgttcggc
cggctacagtcgttgagcaacgaaaatggtgagcgctatcggttcacctgggatgcctgt
gatcggatgatccagcaacaaggcctcgacgggggtacaaaatcctacgcctacgatggg
ctggacaacctgatccgcgtgacgtccactccagcgccttatggcaccgggctcgcaatt
gtctcccaagcacctgaagcaccgatcattcatcaattggaacgcgacgccgttggacga
ctgatcgcaaaagtcacggatgatggtcgcaccgaataccagtacgatccactgaaccaa
ctcagcgccgtcacgttcaaggatgcgtcgggcgctgagcagagccttggctttgcctac
aacgcgctcggccaattgcttgaggaacacagtgcctctggcagccttcaccatcgctat
gatgaactcggcaacctgatacaaacccaggtgcctgatggccgctggctcaaccgcctc
tactacgggagcggtcatttgcaccagatcaatcttgacggcgacgtgatcagtgacttc
gagcgtgaccgactccatcgtgaagtcttgcgcactcagggccagcttagtacgcgcagc
gactacgaccccgtcggccgcctacgtgctcgcatacgccgtcatgacagccagcccgcc
ttgctgtcacccgatatgcaaagacagttcgagtacgacccggctgacaatttgatcgga
aagctcgatcagcggccctctgcgcgccatcaacaactgtttcattacgacgcaacagac
cgccttatcgcgagccaagactctttgtacggcgctcgtgagacctttgcatatgacgca
gcagccaacttgcttgacagcgtcaaccccagccaggggaaggtgctccacaacaggttg
gtcagctttcaagacaagcgttatcgctatgacggcttcggccgagtaatcgaaaagcgc
agcgggcgatacggtgtacaacggtttagctatgacgccgaaagccgcctggtagaagta
cgcaatgaaaagggccatgtggttcggatggtctacgacgcgctggatcggcgtatcaaa
aagaccgaacaggatcgcaatggttataccttgagccaagtcagcttcatttgggacggt
ctgcgactgctctcagagacgcaaaatgaacgcagcagcctctatgtctatctcaatcaa
ggacacgagcccttggcgcgagtcgatggattgggcgtgcacaagaagacccgttattac
cacaacgacctcaatggcttgcccgagcaattgaccgagagcgatggaaacatcgtctgg
aaagcgatctatcaggtgtggggtaataccgttagtgaagaacgggaaccctactatctg
gaagatcagaatattcgcttccaaggccagtatctggaccgagaaaccggactgcactac
aacacgttccgcttttatgaccccgatatcggcagattcactacagaagacccggttgga
ttgctgggcggcattaacctctatcagtacgccaccaaccctctgggctggagtgaccca
ctgggctggtgctcgacgaagctaggcaagaacatgggggctcgcaaaggtgacggtatg
gccaaccatcacctgatacccgaggagctgatcaaacacaaagagttcggcaaaatgttc
tccaggctgaaaaagataggttgggacccggatggcgcctccaacggtgctttcctgcca
ggatcaaaggaccttgccgctaaaacgcagcttcctggacattggtcgaaccataacaag
tacaccgatgctgtcagggacaggctcaggagcttgaacaaacaacaagccgggttatct
gatatggacctcgcactggaagtctcgaacatccaaaaatgggcgagcggcgggctgcag
aatggcctcttcaaaactgatgcagttacaggacgacttttatga
DBGET
integrated database retrieval system
