Pseudomonas pergaminensis: KUA23_30040
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Entry
KUA23_30040 CDS
T08563
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ppeg
Pseudomonas pergaminensis
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppeg03016
]
KUA23_30040 (mnmE)
Transfer RNA biogenesis [BR:
ppeg03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
KUA23_30040 (mnmE)
Prokaryotic type
Methyltransferases
KUA23_30040 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
Gtr1_RagA
YmdB
Roc
Motif
Other DBs
NCBI-ProteinID:
USW01187
LinkDB
All DBs
Position
complement(6604880..6606250)
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AA seq
456 aa
AA seq
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MSAPRETIAAVATAQGRGGVGIVRISGPLASVAAKAISGRELKPRYAHYGPFLDADETVL
DEGLALYFPGPNSFTGEDVLELQGHGGPVVLDMLLQRCLQLGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSAQAARNALRSLQGAFSLRVHNLTEQLISLRIYVEAAIDFPEEE
IDFLADGHVLAMLDKVRDELSTVLREAGQGALLRDGMTVVIAGRPNAGKSSLLNALAGRE
AAIVTEIAGTTRDILREHIHIDGMPLHVVDTAGLRDTDDQVEKIGVERALKAIGEADRVL
LVVDATAPEAVDPFALWPEFLEQRPDPAKVTLIRNKADLTGEVIAMETSADGHVTISLSA
KSAGEGLELLREHLKACMGYEQTSESSFSARRRHLEALRHASAALEHGRAQLTLAGAGEL
LAEDLRQAQQLLGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcctcgtgaaaccatcgctgctgtcgctaccgctcagggtcgcggaggtgtc
ggtatcgttagaatttccgggccgctcgcaagcgttgcagccaaggctatcagcggtcgc
gagttgaagccgcggtatgcccattacggcccgttcctggatgcagacgaaacggtgctg
gacgaaggcttggccctttatttccctgggcccaattcctttaccggggaagatgtcctg
gaattgcagggccacggcggcccggttgtgctggatatgttgctgcagcgttgcctgcaa
ctgggctgccgcttggccaggcctggggagttcagcgaacgcgcctttctcaacgacaag
ctcgacctggcccaggctgaggccattgctgatttgatcgaagccagttctgcacaggct
gcacgcaacgcactgcgctcgctgcagggcgcgttctcgctacgtgtgcataacctgacc
gaacaactgatcagcctacgcatatacgtcgaggcggcgattgattttcccgaggaagaa
atcgatttcctcgccgatggccatgtcttggcgatgctcgataaagtccgtgacgagtta
tccacagtgttgcgtgaagccgggcaaggtgcgctgctgcgtgacggcatgacggtggtg
attgctggacggcccaacgcaggcaaatccagtctgttgaatgcgctggcgggccgtgag
gccgccatcgttacagagatcgccggcaccacccgggatatcctgcgcgaacatatccac
atcgacggcatgccactgcacgtggtcgacaccgccggtttgcgcgacaccgatgaccag
gtggaaaagatcggcgtggaacgcgcgctcaaggccatcggcgaagcggatcgagttctg
ctggtagtggatgcgacggcgcccgaggctgtggatcctttcgcgttatggccggagttc
cttgagcaacggccggacccggccaaggtcaccttgattcgcaacaaagccgacttgacg
ggtgaagtcattgcgatggaaaccagcgcggatggccacgtcacgattagcctgagcgcc
aagtcggcgggtgaaggcctggaactgctgcgcgagcacctcaaggcttgtatgggctac
gagcagacctcggaaagcagcttcagtgcgcgccgtaggcacctggaggcgttgcgccac
gcgagcgcagcgttggagcacggccgggcacagctgaccttagcgggggcaggggagctg
ctggcggaggatctgcgtcaggcgcagcagctgttaggagagatcaccggtgcgttcagc
tccgatgatttgttgggccggatcttttccagcttctgcatcggcaaataa
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