KEGG   Pyricularia pennisetigena: PpBr36_00273
Entry
PpBr36_00273      CDS       T08194                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ppei  Pyricularia pennisetigena
Pathway
ppei03018  RNA degradation
ppei03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PpBr36_00273
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PpBr36_00273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppei03019]
    PpBr36_00273
   03041 Spliceosome [BR:ppei03041]
    PpBr36_00273
Messenger RNA biogenesis [BR:ppei03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PpBr36_00273
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PpBr36_00273
Spliceosome [BR:ppei03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PpBr36_00273
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 40729771
NCBI-ProteinID: XP_029752503
LinkDB
Position
2:1075061..>1075669
AA seq 111 aa
MVHLLNSYVDKRVVIMTTDGRMLIGTLINSDNQANIKNRLGPPPPQILYNVTERHIAPAD
GDEDSVDRPSVGTEIIRGSTILVVGLVDEELEGSIDWTKVRGEPIGDTYNP
NT seq 336 nt   +upstreamnt  +downstreamnt
atggttcacctcctcaactcctacgtcgacaagcgcgtcgtgataatgacgacggacggc
cgcatgttgataggcacgctcatcaactcggacaaccaagccaacattaaaaaccgcctc
ggaccgcccccgccacagatcctttacaacgttacagagcgccacattgcaccggcagac
ggcgatgaagactccgtcgaccggccgtcggtaggcaccgagatcatccgcggatcgacg
atactcgtggtcgggctggtggacgaagagctggaggggtccatcgactggaccaaggtc
aggggtgaacccattggggatacatataatccgtga

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