Pyricularia pennisetigena: PpBr36_00273
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Entry
PpBr36_00273 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03018
RNA degradation
ppei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PpBr36_00273
09123 Folding, sorting and degradation
03018 RNA degradation
PpBr36_00273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_00273
03041 Spliceosome [BR:
ppei03041
]
PpBr36_00273
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PpBr36_00273
mRNA degradation factors
5'-3' decay
Lsm complex
PpBr36_00273
Spliceosome [BR:
ppei03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PpBr36_00273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
40729771
NCBI-ProteinID:
XP_029752503
LinkDB
All DBs
Position
2:1075061..>1075669
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AA seq
111 aa
AA seq
DB search
MVHLLNSYVDKRVVIMTTDGRMLIGTLINSDNQANIKNRLGPPPPQILYNVTERHIAPAD
GDEDSVDRPSVGTEIIRGSTILVVGLVDEELEGSIDWTKVRGEPIGDTYNP
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggttcacctcctcaactcctacgtcgacaagcgcgtcgtgataatgacgacggacggc
cgcatgttgataggcacgctcatcaactcggacaaccaagccaacattaaaaaccgcctc
ggaccgcccccgccacagatcctttacaacgttacagagcgccacattgcaccggcagac
ggcgatgaagactccgtcgaccggccgtcggtaggcaccgagatcatccgcggatcgacg
atactcgtggtcgggctggtggacgaagagctggaggggtccatcgactggaccaaggtc
aggggtgaacccattggggatacatataatccgtga
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