Pyricularia pennisetigena: PpBr36_01719
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Entry
PpBr36_01719 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PpBr36_01719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_01719
03041 Spliceosome [BR:
ppei03041
]
PpBr36_01719
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PpBr36_01719
Spliceosome [BR:
ppei03041
]
Complex B
Other components
Prp19-related factors
PpBr36_01719
Complex C
PpBr36_01719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_8
TPR_15
RPN7
NRDE-2
Motif
Other DBs
NCBI-GeneID:
40731208
NCBI-ProteinID:
XP_029752021
LinkDB
All DBs
Position
2:6120127..6122785
Genome browser
AA seq
832 aa
AA seq
DB search
MSPAAALANGPVRQPDLHLVTDDDFVYEQDIQRSPGSTKPWLAYISYKIQHGTIEEQAFV
LERACIQLPRSYKLWKMYLNFRTKHIAKLNAAIFAAEYRKVNSLFERALILLNKMPRIWE
MYLKFLIKQPLVTLTRRTFDRALRALPLTQHNRIWALYLPFANSAAGPTAVKIWRRYMQV
HPEDAEDFIELLYQVGYYTEAARKYIDVLNNPRFTSKHGKGHFELWSEMVELLVEHATEV
EVGYETGIDVERIIRSGIERFADQRGKLWVGLATYWIRRGSFERARDVFEEGITTVMTVR
DFTLVFDSYAEFEESVIGAMMEVAGQRAEKGVVDEAADFDLDIRMMRFEHLMDRRPFLLN
DVLLRQNPNNVNEWEKRVALWGDNHNEVVNTYTNAIAAVQPKKASGPFHQLWANYAKFYE
RGGDLRSARIIMEKAVKVPFKSVVELADMWIEWAEMELRNDNFEEAVRIMAKAVQAPKRS
TVDYFDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKKVYERIFELRIATPQTVVNYA
NLLEEHKYYEESFKIYERGLDLFSYPVAFELWNMYLTKAVDRKISIERLRDLFEQAVEGC
PPKFAKIIYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLPS
TRQIYERAIAALPDDEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTTPAFWTKW
EQFEVQHGNEDTFKEMLRIKRAVQAKYNTDVNFIASQALARSQQQRQANGHGNGTENGDD
GVVDAMEALERQARAPAGFVAATEGNIKGDAATAKTAVTANPDAIDIDDMED
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcggcagcgctcgcaaacggccctgttcggcagccggacttgcatctggtg
accgacgatgattttgtctacgaacaagacatccagcggagtccaggcagcacgaaaccg
tggctggcatatattagctacaagattcagcatgggacgattgaggagcaagcctttgtg
ctcgaaagggcttgcatacaacttccccgatcctacaaactttggaagatgtaccttaac
ttccgcacaaaacacatcgcgaagctcaatgccgccatctttgcagccgaatatcgcaag
gtcaactcgctgttcgaacgtgctctcatcctactcaacaagatgccacggatatgggaa
atgtatctgaagtttctcatcaagcagcctctcgttacacttacccggcgcacttttgac
cgggctctacgcgcccttcccctaacgcagcacaaccggatatgggcgctatacctgcca
ttcgccaactcggctgcagggccgacagcggtgaaaatatggcgtcgctacatgcaggtg
catcccgaggacgctgaggactttatagaactcctttaccaagttggctattacacagaa
gctgcgaggaagtacatcgacgtgctcaacaacccacgtttcaccagcaagcacggcaag
ggtcactttgaattgtggagcgagatggtcgagctgcttgtggagcatgctaccgaggtc
gaggtgggctatgagacgggaattgacgttgagcgcatcatccggagtggcatcgaacga
tttgccgaccaaagaggcaagttgtgggtcggcctggcgacttattggatcaggagggga
agctttgagcgcgcacgagacgtgtttgaagaaggcattacgaccgttatgaccgtccgc
gactttactctcgtttttgactcgtatgctgaatttgaggagtccgtcattggagcgatg
atggaagtggccggccaaagggccgagaaaggcgttgtcgatgaggctgccgactttgat
ctggacatccgcatgatgcgcttcgagcatttgatggaccgaaggccattcctgttgaac
gacgttctcttacgccagaatcccaacaatgtcaatgagtgggagaagcgggttgccctc
tggggcgacaaccacaacgaggtggtcaacacatataccaatgcgatcgctgcggtccag
cctaaaaaagccagcggaccgtttcatcagctttgggcaaactacgccaaattctacgaa
cgaggtggcgacctgcggagcgcaaggatcatcatggagaaggccgtcaaggtgcccttc
aagtcggtcgtggagctggctgacatgtggattgaatgggccgagatggagcttcggaac
gacaattttgaggaggcggtccgcatcatggccaaggcggtacaggcgccgaagagatca
actgttgactactttgacgagactctgacaccacagcagcgagtgcacaagagctggaag
ttgtggagcttttatgtcgacttggtcgagagcgtgggcacccttgaggacaccaaaaag
gtctacgagcgcatctttgagttgcgcatcgccacgccgcagaccgtggtcaactacgca
aacttgctggaggaacacaagtactacgaggagtcgttcaagatctacgagcgcgggctg
gacctgttcagctacccagtcgcgtttgagctctggaacatgtacctcaccaaagcagtg
gatcgcaagatcagcatagagaggctgcgtgatcttttcgagcaggccgtcgaaggatgc
ccgcccaaatttgccaagatcatctaccttatgtatggcaacctcgaggaggaacgaggt
ctggcgaggcatgcaatgaggatatacgaaagggcgacgagggcagtgtcagacgaagac
agggccgacatgttcaacttttacatcaccaagtcggcatccaacttcggcctcccttcg
acgcggcaaatatacgaacgggcgatcgccgccttgcctgacgacgaggcacgcgacatg
tgcctcaagtttgccgacatggagaagcggctgggcgagatcgaccgggcacgcgccatc
tacgggcacgcgtcgcagttctgcgacccacgaaccacgccagccttttggaccaagtgg
gagcagtttgaggtgcagcacggcaacgaggacacgttcaaggagatgctgcgaatcaag
cgcgcggtccaggccaaatacaacacggacgtcaactttatcgcctcgcaggcgcttgcg
cgcagccagcagcagaggcaggcaaacggacacggcaacggcaccgagaacggcgacgac
ggcgtcgtcgacgccatggaggccctcgagcgccaggcccgcgcgccggccggcttcgtc
gcggcaaccgaggggaacatcaagggcgacgcggctacggcgaagactgccgtcacggca
aatcccgacgcaatagatattgatgatatggaggattga
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