Pyricularia pennisetigena: PpBr36_01968
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Entry
PpBr36_01968 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03008
Ribosome biogenesis in eukaryotes
ppei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PpBr36_01968
09123 Folding, sorting and degradation
03018 RNA degradation
PpBr36_01968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_01968
03009 Ribosome biogenesis [BR:
ppei03009
]
PpBr36_01968
03016 Transfer RNA biogenesis [BR:
ppei03016
]
PpBr36_01968
03036 Chromosome and associated proteins [BR:
ppei03036
]
PpBr36_01968
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PpBr36_01968
mRNA degradation factors
5'-3' decay
5' exonucleases
PpBr36_01968
Ribosome biogenesis [BR:
ppei03009
]
Eukaryotic type
Pre-60S particles
RNases
PpBr36_01968
Transfer RNA biogenesis [BR:
ppei03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
PpBr36_01968
Chromosome and associated proteins [BR:
ppei03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PpBr36_01968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_N
XRN_M
XRN1_D2_D3
XRN1_D1
SH3_12
R3H
Motif
Other DBs
NCBI-GeneID:
40731457
NCBI-ProteinID:
XP_029751231
LinkDB
All DBs
Position
2:7049704..7054011
Genome browser
AA seq
1435 aa
AA seq
DB search
MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSHDTSFRLSEDEM
FIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEMARDKAVREGQ
ELPKEEPFDSNCITPGTEFMAKLSEQLKYFVNKKVSEDTEWQGCEIVLSGHEVPGEGEHK
IMEYIRNAKAQPDYNHNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSKNQSKE
LEHQNFYLLHLCIVREYLELEFQDLKKDGRMTFPFDMERVIDDFILMAFFVGNDFLPNLP
HLHINEGALALMFRLYKEILPKCDGYINEGGRVNLQRLGLLLEGLGEAERRFFEVDMQNE
HWFRSKQQMENSESAPVKSRPKGQLQVTTSQKNLWKHKIKPFITKRPQTPLNLGTGLNAA
DRKFAQEIADSFRLTYETLADDEGNRAIVLSFPKLPAASENDDDDDGFEEEGDAAAHREM
LKYDRAAVVDTSPEEAKAAMEVLYQQKFQEWKDKYYSEKFEWTPETKEQGLRELAENYVQ
GLQWVLYYYYRGIRSWPWFYKFHYSPMISDVMKGLNADMNFTLGQPFKPYEQLMGVLPDR
SKKIVPTVYWDLMTDPNSPIIDFYPRDFELDMNGKKQEWEAVVKIPFIDEKRLLDGMATR
NHLLSDVEKSRNGFGVALKFTYDPNLDFQYPSSLPGIFPDIPHCRCVMNIFELPPTEGLE
YLHGLTDGALLNVSALAGFPSLATLPYTAALGFHGVNVFQQESRNESMVVTLSDTEMKTK
SSAAVMKLGQRCHVGYPFLTEAKVVRVSDELFNYTLDTNGKVVQTPHQHKEMEQFHSKAR
RIEEFYSKRLGILIGDVESLVHVEMLKGLIKTEEGATIKEYGEVPGMETDYAPQVIVDEV
INEDERFIERAALPIEEEFPLGCHAFFLGEYAYGRPLEVVGHKGNKVDVRVSVLKKPEAD
FAKNIIFQAERNNRYVPSYAVAKSLDLHPLALSRITASFFVYTMKGSLKVNLGLNLKFES
KKQKVLGYSRKSGSGWEFSPATIGLLAQYMQKFPDLFAGLKRLPSGNEIKDTDIWQDEKV
AQARVKEIGAWLKTIETSKFERVPLDAEQLDSEVVMALAASTDQLNLAAPEFEAKGLKAV
PRSALLKPEDAEVRLGNQNFALGDRVVYVAASGKVPIAVRGTVIGISRTPTAKLLDIVFD
ITFMSGGSLGERCPPFRGQTVASSTVLNLTNRQVVTGSKATLARKPLAPSVTTLSGGVNG
ANGLRQMRDSPTPPPLRGSWRGALNGSSANGGGRGRGAAGAGYNGTQGPRNGGPLQHSSL
VYRPAPGADGHGQQQQRGGRGGGRGRGGLGYDNAAGQANGYSAHPNGSGAGASPMPTQSY
NNVPPPASLDTSSGRGRGRGRGRGARGGPNMGGRGGQHGRGRGGGGSGAPRGTSS
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcccaagttcttcaggtggctctctgagcgctacccggccatctcgcagttg
atcgcggaaaaccgcattcccgagtttgactgtttatacctcgacatgaacggcatcatc
cacaactgcacacacaaggactcccatgatacgtcctttcgcttgagcgaagatgagatg
tttattcgcatcttcaactatatagaacatcttttcggcaagatcaaacccaagcagttg
ttctttatggcaatagacggtgtggcgccccgcgccaaaatgaaccagcagcgtgctcga
cgtttccgcactgcgctggacgccgagatggctcgcgacaaggctgttcgcgagggccag
gagctccccaaggaggagccgttcgacagcaactgcattacgccagggacagagttcatg
gcaaagctgtctgaacagctcaagtatttcgttaacaagaaggtgtcagaggacaccgag
tggcagggttgcgagattgtgctgtcggggcatgaggttccgggagagggagagcacaaa
atcatggagtatatccgcaacgccaaggcccagccggattacaaccacaatgtccgccac
tgcctgtacggccttgacgccgatctcatcatgctgggtctgctaagtcatgacccccat
ttctgcctcctccgtgaggaggtcacctttggcaggcagtccaaaaaccagtccaaggag
cttgagcaccagaacttttacctcttgcatttatgcattgtgcgggagtatctagagcta
gagttccaggatctcaagaaagatggtcggatgacgttcccatttgacatggagagggtc
attgatgatttcatcctcatggcatttttcgtcggcaacgatttccttcctaatcttccg
catttgcacatcaacgagggcgctttggcgcttatgttccgcctgtacaaggagatattg
cccaagtgcgacggttacatcaacgagggcggcagagtaaaccttcaaagactgggtctg
ctcctggaaggccttggagaagccgagcgcaggttctttgaggtggacatgcagaacgag
cattggttcaggtctaagcaacagatggagaactctgagagcgctccggtcaagtcgcgg
cccaagggtcaactccaagtcaccacgtcgcagaaaaatctctggaagcataagatcaag
ccctttatcaccaagcggccacagacaccgctcaacctagggacaggcctcaatgcggca
gaccgcaagtttgcacaggagattgccgatagcttccgccttacttacgagactctggct
gacgacgaaggaaacagggctatcgtactttccttcccgaaactgcccgccgcgtctgaa
aatgatgacgacgatgatggtttcgaggaggagggtgatgcagccgcccaccgtgagatg
ctcaaatacgatcgcgccgctgtcgtagatacatctcctgaggaggcaaaggccgccatg
gaggttctctaccagcaaaagttccaggaatggaaggacaagtattactctgaaaagttc
gaatggacgcctgaaaccaaggagcagggactgcgagaattggcagagaactacgtccag
ggtcttcagtgggttttgtattactactaccgtggcattcggtcgtggccatggttctac
aagttccattactcgcccatgatttcggacgtcatgaagggtttgaatgccgacatgaat
ttcacactcggccagcccttcaaaccatatgagcagcttatgggtgttcttccagaccga
agtaagaagattgttcccaccgtctattgggatctcatgaccgaccccaactcgcccatc
atcgacttctacccccgcgattttgagttggacatgaacggaaagaagcaagaatgggag
gccgtggtgaagattcccttcattgacgagaagcgacttttggacggaatggccaccaga
aaccatctcttgtctgatgtggagaagtcgcgcaacggctttggcgtggctctcaagttc
acttacgacccgaacctggattttcagtacccatcatcactgcccggcatcttccccgac
attccgcattgtcgctgtgtcatgaacatctttgagcttccccccacagaaggtttggag
taccttcacggacttacggatggcgctctgttgaacgtatctgcactggcgggattccct
agtctggctacgctgccttatactgctgcgttgggctttcatggcgtcaacgtgttccaa
caggagagtcggaatgagagcatggttgttacgctctccgacactgagatgaagacgaag
tcctctgcagctgtgatgaagctcggacaacgctgccatgttggctatccctttttgaca
gaggccaaggtcgtccgtgtctctgatgaactgttcaactacacgctggatacaaacgga
aaggtcgtacagacacctcatcagcacaaggaaatggaacagttccatagcaaggcccgg
cgcatcgaagagttttacagcaaaagactaggcatcctcattggcgatgtcgaatctctg
gtgcatgtggaaatgctcaagggcttgattaaaaccgaggaaggtgccactatcaaggag
tatggcgaggttcctggtatggagacagactacgcaccgcaggtcattgtcgatgaggtg
atcaacgaagacgagcggttcatcgagcgagccgctctaccgatcgaggaggaattccca
cttggctgtcacgcatttttcttgggtgaatatgcttacggacggccattggaggtggtc
ggacacaagggtaacaaggtcgatgttcgggtctctgtcctcaagaagcccgaggccgac
tttgccaagaacatcattttccaagcggaacgtaataacagatacgtgccgtcctatgcc
gttgccaagagtcttgacctccaccccctcgctctcagcaggataacagcatcattcttt
gtttacaccatgaagggcagcttgaaggttaatttgggcctcaacctcaagttcgagagc
aagaagcaaaaagtgctcgggtactcgaggaagtcgggttcgggatgggagttcagtccg
gctacgatcggcctgctggcacagtatatgcaaaaattcccggatctctttgctgggctc
aagcgactaccgagcggcaatgagatcaaggacacggacatttggcaggacgagaaagtg
gcgcaggcgcgtgtgaaggagattggcgcctggctcaagacgattgagacgagcaagttt
gagcgtgtgccgctcgatgccgagcaacttgactcggaagtcgtcatggcgttggcagca
tctacagaccagcttaatctcgcagcccctgagtttgaagccaagggactcaaagcagta
ccccgaagtgcgctgctcaagcctgaggacgccgaagtacgactcggaaaccagaacttt
gcattgggtgaccgcgttgtgtatgttgccgcgtccggcaaggtacccatcgcagtccgc
ggcaccgttattggcattagccgcacgccgactgccaagctacttgacatcgttttcgac
atcaccttcatgagcggtggcagtctgggagagcgatgcccgccgttccgtggccagacg
gttgcctcatccaccgtgctcaacctgaccaacaggcaggtcgtgacgggaagcaaggct
acccttgcgcggaagcctcttgccccgtccgttaccacactttctggtggcgttaatggt
gccaatggactcaggcagatgagagattcgccgacacctcccccgcttagaggctcttgg
agaggtgcattgaacggaagcagcgcaaacggcggcggccgtggcagaggagctgcgggc
gctggctacaatgggactcagggcccgcgtaacggtgggcccttgcagcacagctcattg
gtgtataggcccgcaccaggagcggatggtcatggacaacagcagcagcgtggaggtcgt
ggtggggggcgcggacgtggtggtctcggatatgacaacgccgcaggtcaggccaacggc
tactccgcacaccccaacggtagcggggcgggcgcttcgccgatgccaacgcagtcatac
aacaacgtgccgccgcccgcaagcctggacacatcatctggtcgcggtaggggccgcggc
cgtgggcgtggagctcggggcggaccaaacatgggtggtcgcggaggccaacacggacgt
gggcgcggcggcggtggttcaggcgctccgcgcggcacctcatcttag
DBGET
integrated database retrieval system
