Pyricularia pennisetigena: PpBr36_04341
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Entry
PpBr36_04341 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03022
Basal transcription factors
ppei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PpBr36_04341
09124 Replication and repair
03420 Nucleotide excision repair
PpBr36_04341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppei03021
]
PpBr36_04341
03400 DNA repair and recombination proteins [BR:
ppei03400
]
PpBr36_04341
Transcription machinery [BR:
ppei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PpBr36_04341
DNA repair and recombination proteins [BR:
ppei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PpBr36_04341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
40733807
NCBI-ProteinID:
XP_029749631
LinkDB
All DBs
Position
6:1773118..1774257
Genome browser
AA seq
379 aa
AA seq
DB search
MNAVDASDHYEIHSGEDTPSLLVVVIDTNPRAWALLRDVLPISKAIANILVFINAHLALS
SSHSVAVIAAHTHRAVWLYPSPPKPPARDATDVEMTDADASKDRKPTTSSANKLPQFAQI
ESTLLSSLHDLIQNTTKAEIASATTTLISGGLSLALAHINKTKELALATGIDATKAEPAA
PGVSASTAGAGVGGGGGSAARTVLHSRILTVSVSDSSADQYIPTMNAVFAASSAGVPLDV
LALRGAAPFLQQGAFITGGTYIAAREPRGILAYLMTGFASTSGVGSQGLLVSPGSESVDF
RAACFCHRRAVDTGYVCSVCLSIFCEVPPGAECLTCGSKLALGAYGHKPAVVPRVRKKKK
RKVGVNGDSREGTGTPRPT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgtcgatgcctcggatcactacgagatccactcgggtgaggacacgccgtcg
ctcctcgtcgtcgtcattgacaccaacccgcgcgcctgggctctgctgcgcgatgtgctg
ccaatctcaaaggccatagccaacatccttgtctttatcaatgcccacctcgctctcagc
agctcacattccgtcgccgtcatagcggcccacacccaccgcgcagtctggctctatccg
tcgccgccgaaaccacccgcccgcgatgccaccgacgtcgaaatgacggatgccgatgcc
agcaaggacaggaagcctacgacctcatcggccaacaagctaccccaatttgcccagatc
gaatccaccctcctctcgtcgctccacgacctgatccagaacaccaccaaggcggagata
gcctcggccacgacgacccttatctcgggcggtctctccctggcgctcgcacacatcaac
aaaaccaaggagctcgctctggccaccggcatcgatgccaccaaggccgagcctgccgcg
ccaggcgtgtcggcctcgacggccggcgcaggtgtcggcggcggcggcggttccgcggcg
cggaccgtgctgcactcgcgcatcctgaccgtgtccgtgtccgactcgagcgccgaccag
tacatcccgactatgaacgccgtgttcgcggcgtcgagcgccggcgtgccgctcgacgtg
ctcgccctgcgcggcgccgccccgttcctgcagcagggcgcctttatcacgggcggcacc
tacatcgccgccagggagccgcgtggcatcctcgcctacctcatgacgggctttgctagc
accagcggcgtcggcagtcagggcctactcgtcagccccgggtccgaatcggtcgacttc
cgcgccgcctgcttctgccaccgcagggctgtcgatacgggctacgtctgcagcgtctgc
ctgagcatcttttgcgaggtgccgcccggcgccgagtgtctgacctgcggatcaaaactt
gcgctgggtgcgtatggccacaagcctgccgtcgtcccgcgcgtgcgcaagaagaagaag
aggaaggttggtgtcaatggggacagcagagaggggaccggcactccacgccctacctga
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