Pyricularia pennisetigena: PpBr36_06045
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Entry
PpBr36_06045 CDS
T08194
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PpBr36_06045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppei03021
]
PpBr36_06045
03041 Spliceosome [BR:
ppei03041
]
PpBr36_06045
03036 Chromosome and associated proteins [BR:
ppei03036
]
PpBr36_06045
Transcription machinery [BR:
ppei03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PpBr36_06045
Spliceosome [BR:
ppei03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
PpBr36_06045
Complex B
PpBr36_06045
Complex C
U2 SnRNP specific factors
PpBr36_06045
Chromosome and associated proteins [BR:
ppei03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
PpBr36_06045
TFTC complex
PpBr36_06045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
40735497
NCBI-ProteinID:
XP_029745776
LinkDB
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Position
4
Genome browser
AA seq
1216 aa
AA seq
DB search
MATTSNMFLYSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLM
SHDVFGIIRDLASFRLAGSSKDYLIIASDSGRITIVEYLPAQNRFSRIHLETFGKSGVRR
VVPGQYLAADPKGRACLIASVERCKLVYVLNRNSQAELTISSPLEAHKNGTLTLSLVALD
VGYSNPVFAALEVDYSEVDQDPKGDAAQNVETVLNYYELDLGLNHVVRKWFDVVDPTASM
LFQVPGGSDGPSGVLVCGEENITYRHSNQDAFRVPIPRRKGATEDPNRKRNIVSGVMHKL
KGSAGAFFFLLQTEDGDLFKVTIDMVEDAEGNPTGEVSRLKIKYFDTIPVSNNLCILKSG
FLFVASEFGNHLFYQFEKLGDDDEELEFSSNDFPVDPKEPYEPVYFYPRPTENLALVESI
DSMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRMLKHGLEVNEIVASQLPGTPSAVWT
TKLRRDDEYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVSTLAVQQLGDDGLVQVHP
KGIRHIRNGVVNEWSSPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKKE
MFGTVTSLSLGEVPEGRLRSSYLAVGCDDCTVRILSLDPESTLESKSVQALTAAPSALSI
MSMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQKRT
CVLALSSRSWLGFSDPVTKGFTMTPLDYEELEWGWNFVSEQCEEGMVGVNGQFLRIFAIE
KLGDNIIQKSIPLTYTPRKLAKHPTQRIFYTIEADNNTLPPELREQLMAAPTAVNGDARV
LPPEEFGYPRGNGRWASCISVVDPLGDGEELEPGVVQRIDLDNNEAAVSMAVVSFASQDG
ESFLVVGTGKDMVVNPRRFSEGYIHVYRFSEDGRELEFIHKTKVEEPPTALLPFQGRLVA
GIGRMLRIYDLGLRQLLRKAQAEVAPQLVVSLNTQGSRIIVGDVQHGLIYVAYKSETNRL
IPFADDTIARWTTCTTMVDYDSTAGADKFGNLWILRCPEKASQESDEPGSEVHLVHSRDY
LHGTSNRLALMAHVYTQDIPTSICKTNLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFF
QSLEQHLRSEDPPLAGRDHLMYRGYYVPVKGVIDGDLCERYTLLPNDKKQMIAGELDRSV
REIERKISDVRTRSAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacatctaatatgttcttgtattctctgagtatccagcctccatccaccatc
acgagagctatccttggccagttctcaggaaccaaggagcaacagattgttgccgcatca
ggctcgcggttgactctctatcgccccgatcccactcagggcaaggtcgtcccgcttatg
tcgcatgatgtctttggtattatccgagatctggcctcgtttcgtctggctggcagcagt
aaagactatttaatcatcgcaagcgactctggtaggattactattgtcgagtatttacca
gcacagaaccggttctccaggatacatctcgagacctttggcaagtcaggagtccgacgc
gtagttccgggccaatacctcgctgccgatccaaaaggtagagcatgcctgatagcttca
gtagagcgctgcaagctggtctatgtgctcaaccgcaattctcaggccgagctgaccatc
tcatctccgcttgaggctcacaaaaatggcacgctcaccctctctctggtggctcttgac
gttggctactcgaaccccgtcttcgccgccctcgaggttgactactccgaagttgaccaa
gatccaaagggtgacgcggcccagaacgtggaaactgttttgaactactacgagctggat
cttggactaaaccacgttgtgcgaaagtggttcgacgtcgtcgacccaaccgccagcatg
ctgttccaagtcccaggaggtagcgatgggcccagtggagtcctggtatgtggcgaagaa
aacatcacatataggcattccaaccaggacgccttccgtgttccaataccaaggcgcaag
ggtgcaactgaagatcccaataggaaacgcaacatcgtttctggtgtaatgcacaaactc
aagggaagcgccggtgcatttttcttcctgctgcagaccgaagacggagatctattcaaa
gttacaattgatatggtggaagatgcagagggaaatccgactggggaagtgagtcgactc
aagattaaatattttgacaccatccccgtgtccaacaacctttgcattttaaagagcggt
ttcctcttcgtcgccagcgaattcggcaatcatctcttctaccaattcgagaaactcggc
gacgacgatgaagagctcgaattttccagtaatgatttcccggttgaccccaaggaacca
tatgagcccgtctacttttaccccaggccaactgaaaacctggcccttgtcgagagcatc
gactcaatgaatcctttgatggatctcaaggtcgccaacctgaccgaggaggatgcgcct
cagatatacacggtcagcgggaaaggagcccgcagtaccttccgtatgctcaagcatggc
ttggaggtcaacgagatcgttgcgtcacagttaccaggaacgccctcagcggtatggact
accaagctacgtcgagatgacgagtatgatgcgtacatagtcctatccttcacaaatggt
acgctggttttaagcatcggtgagacggtcgaggaagtcagtgacacgggctttttgtcg
tccgtctctaccctggccgttcaacagttgggcgacgatgggctcgtccaagtacacccc
aaaggaatccgtcacattcgcaatggtgttgtcaacgaatggtcatccccacaacaccgc
tctatagttgccgctgcgaccaacgaaaggcaggtcgctgttgctttgagcagtggtgaa
attgtctacttcgaaatggatacagatggctccctggcggagtatgacgagaagaaagag
atgtttggcactgtgaccagtttgagcttgggcgaggttcccgaagggcgtcttcgaagc
tcgtacctggcggtcggctgtgatgactgcacagtaagaattctgagccttgacccggag
tcgactctggagagcaagtcagtacaagcactcacggcagccccgtcggctctgtcaata
atgtcgatggaggactcatcttctggcggcacgacgctctatcttcatatcggtctgaac
tctggtgtttacctgcgcaccgtgctagatgaagtaacgggggaacttacagacacacga
caaaagttcttggggccaaaggccgtaagactattccaagtctccgtacagaaaaggacc
tgcgtgcttgctctcagttcaaggtcatggcttggattctccgacccagtcaccaagggt
ttcaccatgacacctttagattatgaagaacttgaatgggggtggaactttgtgagcgag
cagtgcgaggagggcatggtcggcgtcaatggccagtttctcagaatctttgccatcgag
aaacttggagacaacatcattcagaagtccatccccttgacatacacgccacggaaactg
gctaaacaccccactcagcgcatattctataccatcgaggcagacaacaacactttgcca
cccgaactgcgagagcaactcatggcagcgccaacggctgtaaacggcgacgccagggta
cttcctccagaggaattcggataccctcgcggaaatggtcggtgggcctcctgcatcagt
gttgttgatccacttggtgacggagaagagctggagccaggtgttgtgcaaagaattgat
ctcgacaacaacgaggcggcggtgagtatggctgtcgtgtcttttgcgtctcaggacggc
gagagtttccttgtcgtcggtactggcaaggacatggtagtcaacccacgacgcttcagc
gaaggctacattcacgtttaccgcttctcggaggatgggcgtgagctagagttcattcac
aagaccaaagtcgaagagccacccacagctctcctgccgtttcaggggagacttgtcgcc
ggtattggtcgtatgttgaggatatatgacctcggtctccggcagttgctccgcaaggca
caagcagaagtggcgccgcagctcgtcgtatccttgaacacccaaggcagccgcatcatt
gtcggtgacgtgcagcacggcttgatctatgtcgcctacaagagcgaaaccaacaggcta
atcccgtttgctgacgacaccatcgcaagatggacaacctgcacaaccatggttgactac
gactccacggcgggtgcagacaagtttgggaatctctggatcttgcgatgtcccgaaaag
gccagccaagagtcggacgaaccaggctccgaggtgcatcttgttcacagcagggactac
ctccacggtacatccaaccgcctggctctcatggctcacgtttacacacaagacatacct
acgagcatctgcaagacaaacttggtggttggtgggcaggaagtgctgctttggggcggc
ttccagggtactatcggcgtgctgatacctttcgtcagtcgtgaggatgccgacttcttt
caaagtctcgaacagcatcttaggagtgaagatccgccgttggcagggagagatcatctc
atgtacaggggctattacgtgcctgtcaagggtgttatcgacggtgatctatgtgaaagg
tacactctgttgcctaatgacaagaaacagatgatcgccggcgaactcgatcgctctgtt
agagagattgagcgcaagatctcggacgttcgcactcgttccgctttctaa
DBGET
integrated database retrieval system