Pyricularia pennisetigena: PpBr36_06169
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Entry
PpBr36_06169 CDS
T08194
Name
(RefSeq) uncharacterized protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PpBr36_06169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_06169
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PpBr36_06169
U7-dependent histone pre-mRNA processing factors
PpBr36_06169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
40735621
NCBI-ProteinID:
XP_029745673
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Position
4
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AA seq
963 aa
AA seq
DB search
MFTFSPLQGALSEATASQSLLELDGGVKVLIDLGWDETFDVEKLKEVEKQVPTLSLILLT
HATVPHLSALVHCCKNFPLFARIPIYATQPVIDLGRTLIQDLYSSTPAAATSIPDSALAE
ASYSFSQTQTSGHGFLLQAPSPDEIAKYFSLIQPLKYSQPHQPLASPFSPPLNGLTITAY
NAGHSLGGTIWHIQHGMESIVYAVDWNLARDNVYAGAAWMGGGHGGGGAEVIEQLRKPTA
LVCSTRSAEGGLTRAARDQQLLDTMRMTVSRGGTVLIPVDSSARVLELAYLLEHAWRSEA
STEGGGLSTAKLYLAGRSVHSTIKLAKSMFEWMDNSIVQEFEAGADQGFRRTNGAGGNAD
AKGKDGGPFDFKYLRLLDRKAQVLKLLEPSDDELRGKVILATDTSLEWGFSKDVIAAIAS
DSKNMVVLPEKPAESSKNNPSISRQLWRWWKERKDGVADEQLSGPGSAEQVFAGGRELQI
RESKKVPLADSELSIYQQWLATQRQLNATVQGGGASALEASADVADDVSSESSSDSDDSE
NEQQGKALNASTTQASRKKVVLQDEDLGVMILLKKPGVYDFPVKGKKGRERMFPLAVRRR
RNDEFGELIRPEDYLRAEEREENERPDTQQLQRSDGQDGFGQKRKWDDAGSRNAANGLNR
RGQRGQADDTDAAQATSGPAPDELDLVEDVEEEVVTGPAKLVHTSKTVSVNLRLALIDFS
GLHDRRSLAMLIPLIQPRKLILVAGSADETEAVANDCRRNAIEVFTPPVGAVVDASVDTN
AWVVKLADPLVKRLKWQQVRGLGIVTVTAQLTATPATQKNGIPLLVADEDGANKRQKTKA
TGPEDQESAAEDEEVGVMPTLDVLPVAMVSASRSAAQVLHVGELRLADLRRTMQNLGHSA
DFRGEGTLLIDGTVVVRKTAAGRVEIESVGVPGTGGGPAARMGGTFYAVKKTIYDGLAVV
AGA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtttactttcagtcctctccagggcgcgctgtccgaagcgacagcgtcccagtcattg
ttggagctggatggtggtgtaaaggtcctcatagaccttggatgggacgagacatttgat
gtcgagaagctcaaggaggtcgaaaaacaagttcccacattatcattgatacttcttacg
catgcgaccgtaccgcatctctccgcattggttcattgctgcaagaactttccactcttc
gcacgaattccaatatacgcaacacagccagtcatcgacctcggccggacgcttatccaa
gacttgtattcgtcaactccagcggcagctacttcgataccagacagcgcattggccgag
gcctcatattcgttctcacaaacacagactagtggacatggctttctcctccaggcacca
tctcctgacgagatcgccaaatacttttcactcatccaacccttgaagtattcacaacct
caccagcctctcgcgtctccgttttcgcccccactcaatggcctgactatcacggcttac
aatgccggacattcactgggaggcacaatatggcacatccagcatggcatggagtcgata
gtgtacgcggtcgattggaatttggccagagacaatgtctacgctggcgctgcctggatg
ggtggcggacacggcggaggtggtgcagaggtcattgagcagctcaggaaaccgacagca
ctcgtttgcagtacgcggtcggcagagggtggcttgacgagagctgcgcgagaccaacaa
ctgctggacaccatgaggatgactgtatccagaggtggtacagtcttgataccagtggac
tcaagcgcaagggtgttagaactggcatacctactcgagcacgcttggcgctcagaagcc
agcactgagggcggcgggctcagcactgcgaagctgtacttggccggccgcagcgttcac
agcactatcaaactggcaaagagtatgtttgagtggatggacaacagtattgtgcaggag
tttgaggctggagcagaccagggcttccggagaacaaacggagcaggcggtaatgcggat
gcaaagggcaaagacggaggacccttcgatttcaaatatttgaggttgctggatcgcaaa
gcacaggttctcaagctattggagccctctgatgatgagctcagagggaaggttatcttg
gctaccgacacgagcctcgagtggggcttctccaaggacgtaattgcggccatcgccagc
gactccaagaatatggttgttctcccagagaagcctgccgaaagctcgaagaataatccg
tcaatatcacgccaattgtggaggtggtggaaggagcgcaaggatggagtagctgacgag
cagttgagtgggcctggctctgctgagcaggtatttgccggcggtagggagctacaaatc
agggagtcgaagaaggttccattggcagacagtgaactatcaatataccagcaatggctg
gcaactcagcggcagctcaacgctacggtccaaggtggtggcgcgtcggctctggaggcc
tctgcggatgtagccgacgatgtgtcgtccgagtcatcaagcgactctgatgactcggaa
aacgagcagcagggcaaagcactgaacgcatctacaacccaggccagcaggaaaaaagtt
gtgctccaggacgaagacctcggggtcatgatactgctgaagaagccaggtgtctacgac
tttccggtcaaaggcaagaagggacgcgaaagaatgtttccccttgctgttcgacgaagg
agaaacgatgaatttggcgaactgatccggccggaagactacttgcgcgccgaggagcgg
gaggagaacgagagaccggacacgcaacagctgcagaggagtgacggccaggatgggttt
ggccaaaagcgaaaatgggacgacgcagggtccagaaacgctgcaaatgggctgaacagg
cgtggacagcggggtcaagccgatgacacagatgcagcacaagcgacatcagggcctgct
ccggatgagctggacctggtcgaggatgtcgaagaggaggtggttacgggccctgcgaag
cttgtacacacatcgaaaaccgtctcggtcaatctgcgcttggcactgattgacttctcg
ggccttcacgatcgcaggagtcttgcaatgctgatccctttgatccaaccgaggaaactc
attctggtggcgggttccgcggacgaaacggaggccgtagccaacgactgtcgcagaaac
gcaatcgaggtcttcaccccgccagtcggcgcggttgtcgatgcatcggttgataccaat
gcatgggtagtgaaacttgcggatccactagtcaaacgactcaagtggcagcaagttcgc
gggctgggcattgttacggtcaccgcgcagctcacagcaacgcccgcaacacaaaagaac
ggcataccgctgctggttgcagatgaagatggtgcgaacaagagacagaagaccaaagct
acggggcccgaagaccaggaatcggccgccgaagatgaagaggtgggcgtcatgcccaca
ctcgatgtgctgcccgtggctatggtgtcggcatcgcgctcggcggctcaagtactacat
gttggcgagctgaggcttgcggatctgcggaggacgatgcagaacttggggcactcggcg
gattttagaggagagggtacactcctcattgacggaacggtcgtcgttcgcaagactgca
gccggcagagtcgagattgaaagcgtgggtgtcccaggtactggtggcgggccggctgcg
cggatgggtggtacattctatgctgttaagaagactatatatgatggcttggctgttgtc
gccggggcatga
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