Pyricularia pennisetigena: PpBr36_06333
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Entry
PpBr36_06333 CDS
T08194
Name
(RefSeq) uncharacterized protein
KO
K10754
replication factor C subunit 1
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03030
DNA replication
ppei03410
Base excision repair
ppei03420
Nucleotide excision repair
ppei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PpBr36_06333
03410 Base excision repair
PpBr36_06333
03420 Nucleotide excision repair
PpBr36_06333
03430 Mismatch repair
PpBr36_06333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppei03032
]
PpBr36_06333
03400 DNA repair and recombination proteins [BR:
ppei03400
]
PpBr36_06333
DNA replication proteins [BR:
ppei03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PpBr36_06333
DNA repair and recombination proteins [BR:
ppei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PpBr36_06333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_33
AAA_16
AAA_18
AAA_30
AAA_28
AAA_14
NTPase_1
RuvB_N
AAA_5
AAA_17
Motif
Other DBs
NCBI-GeneID:
40735783
NCBI-ProteinID:
XP_029746019
LinkDB
All DBs
Position
4
Genome browser
AA seq
1079 aa
AA seq
DB search
MPADIRSFFGGKGGAAPAKPAASKKENEPVKKATKARSNDSDDEPVESSKVTTRATPKKK
ASADAAKGTAITASDYFANTASGDKKSQATPKATSKFKSEVEVRISPRTRAKAHAEPSSA
STKTTNKPAPSPAPKATANATAKTTAKATKPKKPVTAYKKYDSDDDDDAFVDDDEDEDDD
IFAADVGGRGKRKNDDYVEEDSDDEILPQPKRVASRGRPRRGAAKDESSDEEEGSKPTKS
AATSRKRKSPPTDPEVSDDEDLKPRKKPAAKPRATKPKVAPTEDPGIQAILDNVPTVRPP
TPPPKDPNAKFDWRKAQAGGGNSGAPPAAGSIDLPEGQEDCLSGLTFVFTGLLKTIGRED
AQALVKRYGGKVTGAPSGKTSFVVLGDDAGPSKLAKIKQHKLKTIDEVGLFHLISTLPAH
GGSGLGAEKAREKREAEAEKVKQAAEEMEAEEKAKRLAAEKARKAAGAKGASAPPAPPPP
NSQLWTTKYAPTALNHICGNKAQVEKIKNWLENWPKSRKYDFKKRGADGLGGERAIIISG
PPGIGKTTAAHMAAKLAGYDVLESNASDTRSKKLVENGVSDVINNTSLLGYFSGDGKKVE
QARKNIVLIMDEVDGMSAGDRGGVGALAKFCKKTEVPLILICNERRLPKMKPFDHVAFDI
RFNRPTVDQIRSRIMTICHREGLGKMPPQVIDALIEGCNKDIRQIINMVHSIKLDGASLD
YTQTKSMTKAWEKHVILKPWDICQKMLAGGLFSPASKATLNDKIELYFNDHEFSYLMIQE
NYLGTKPMALSGKGYNRKEENLKYLELVEKASESISDGDLVDRMIHGPQQQWSLMPTHAV
FSSVRPASYIAGQLMGANFTSWLGNNSKTGKLGRFVREIHSHMRLKSSGDHNEVRQQYLP
VLWNQMIQRLGVDGKDAIDDVIELMDSYYLTRDDFDAIKELGVGPQDESRVNIETQTKAA
FTRTYNSMSHPIPFMKASNVQAPKAAAKEMPDLEEAIEEEDDAAVVADPAVDEDEEELDL
KKDKYIKQPKAKPAKKAAPAKKKTAASKKSAAAEDDFIDDDDEPKPAAKGRGRPAKSKK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggatatacgatctttctttgggggtaaaggcggtgccgcccccgctaaacct
gcagcttcgaaaaaggagaacgaaccagtcaagaaggcaacaaaagctcgcagtaatgat
agcgacgatgagcctgttgagtcctcgaaggttacaacaagagccacacccaaaaagaag
gcgagcgcggatgctgccaaagggactgctatcactgccagtgattactttgcaaatact
gcttcaggtgacaaaaaatcacaggcaactcccaaggctacctcaaaattcaagtcggaa
gttgaggttcgaatcagcccacggaccagggccaaggcacatgcggaaccgagctctgcg
tcgacaaaaacgaccaacaaaccggcaccttcaccggctccaaaggcaactgcaaatgca
accgcaaagactactgcgaaagccacaaaaccgaagaagccggtcacagcatacaagaaa
tacgactcggacgatgacgatgacgcttttgttgatgacgatgaggatgaagatgatgat
atatttgccgcagatgttggaggacgaggcaagcggaagaacgacgattatgtcgaagag
gacagtgacgacgaaattctgccgcaacctaagagggttgcatcccgtggaagacccaga
agaggtgccgcaaaggacgagtcatctgacgaagaggagggttcgaaacccaccaagagt
gctgccactagcaggaaacgaaaatctcctccaactgacccagaagtgtccgatgatgag
gacttgaagccgcgcaagaaaccagctgcgaagccacgagccaccaaacctaaagttgca
cccactgaggacccaggtatccaggctatcttggacaacgttcctactgttcgcccgcca
acgccgcccccgaaagatccgaatgccaagtttgattggcgaaaagctcaggccggagga
ggcaactcaggggcaccacctgctgcgggttccattgatttacccgagggtcaggaagac
tgtctcagtggacttacctttgtgttcacgggtctcctcaagacgatcgggagagaagac
gcccaggctctcgtgaaacgctacgggggtaaagtgacgggtgccccaagtgggaaaacc
agtttcgtggttcttggagacgacgctggccccagcaagcttgcaaagatcaaacagcat
aaattgaagactatcgacgaggtgggactttttcatctgatcagcacgcttccggcgcat
ggaggcagtggtctgggggctgaaaaggcgcgtgaaaagcgtgaggcggaagcggagaag
gtcaagcaggcggctgaggaaatggaggccgaagagaaggctaagaggctagcggcggag
aaagctcgaaaggccgcgggcgccaagggtgcgtctgcaccaccggcaccgcctccaccc
aactcgcagctttggacaacaaaatacgctcccacggcactcaaccatatatgcggcaac
aaggctcaggtggaaaaaatcaaaaactggcttgagaattggcccaagtcaagaaagtat
gacttcaagaagcgcggcgcggatggcttgggtggtgagcgtgccattattatttctggc
cctccagggattggaaagacaacagccgcccacatggccgctaagctggctggctatgac
gttctcgagagcaacgccagtgacacgcggagcaagaagctggttgagaatggcgttagt
gatgtgataaacaacacatcgctcctgggatacttttcgggcgacggcaagaaggtcgag
caagccaggaagaacatcgtcttgatcatggacgaggtagacggcatgtccgccggtgat
cgcggaggtgtcggtgcgctcgcaaaattctgcaagaagaccgaagttccgctcatcctg
atctgcaacgagcgcagattacccaagatgaaaccgtttgatcatgtggcgttcgatatt
cgcttcaacagaccgacagtagatcagattcgatcccggatcatgacgatttgtcaccgg
gagggactaggaaagatgccgccacaggtcatcgacgccttgattgaaggctgcaacaag
gacattcgtcagatcatcaacatggtgcactccatcaaactcgatggcgcctccctcgac
tatactcagaccaaatccatgacgaaggcatgggagaaacacgtcattctcaagccgtgg
gatatctgccagaaaatgcttgcgggtggtctcttctcaccagcaagcaaagctaccctg
aatgacaagattgagctctatttcaatgaccacgagttcagctacctgatgattcaggag
aactaccttggcacgaagccaatggctttgagcggtaagggctacaatagaaaagaagag
aacctcaagtatctggagctggtagaaaaggcctcggaaagtatcagcgacggcgaccta
gtcgatcgtatgattcacggtccgcagcaacagtggtcgctgatgcccacgcacgccgtt
ttcagctcagtcagaccggctagttatatcgctggtcagctcatgggtgccaactttacg
tcatggctgggtaacaatagcaagacaggcaagcttggtcgttttgtgcgcgagatacat
tcgcacatgagactcaagtcctctggtgaccacaacgaagtccgccagcagtaccttccg
gtactttggaatcagatgatccagcgactgggagtagatggtaaagatgccatcgacgat
gtcattgagctgatggacagctactatctcactcgtgacgactttgatgcaatcaaggag
cttggtgttgggcctcaggatgagtccagggtcaacattgagacgcagaccaaggctgca
tttactcgaacctataactccatgtctcacccaataccattcatgaaggcgagcaatgtg
caagcgcccaaggccgcggccaaggagatgcctgacctggaggaggccatcgaggaagag
gacgatgctgctgttgttgcggatcctgccgtcgatgaagacgaagaagaacttgacctc
aaaaaggacaagtacatcaagcagcccaaagccaagccggccaagaaggcggcacccgca
aagaaaaagactgccgcatcaaagaaatcggccgctgcagaggacgattttattgatgat
gacgacgagcccaagcctgcggcgaaaggtaggggtcgtcctgccaagtctaagaagtga
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integrated database retrieval system
