Pyricularia pennisetigena: PpBr36_06406
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Entry
PpBr36_06406 CDS
T08194
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PpBr36_06406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_06406
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
PpBr36_06406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_2
TPR_14
TPR_1
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_8
TPR_11
TPR_12
ARM_TT21_C
ARM_TT21_N
TPR_9
TPR_Slam
TPR_7
ARM_TT21
ANAPC3
HPS6_C
Motif
Other DBs
NCBI-GeneID:
40735856
NCBI-ProteinID:
XP_029746577
LinkDB
All DBs
Position
4
Genome browser
AA seq
1519 aa
AA seq
DB search
MSKAALKAIGELIRQSKWGDAIEEARQFVQKEPKSFQGHIFLAFALDKNQKLEESEQSYL
AAAALKPDDPQPWQGLVKLYQKQGGNKIAAYKVAALELAQRYRDMNDMYRCQCAIDDFTK
HAQAQGEASYVEALEVILPDSPIYPALEGRVPHPAKTYETIARFIETQEKKRINTLIGER
RTRIGARVSEVTIEVKREVWGRSRLGHIYREIINWTNDDELRRVYEEKLLQHCYDRLLVF
APGPDKTVELEVVQKLARDMVIIKHPFKLAWDITIDWQDHKEIREWDVSILRDYCTFFPD
SDLYKIITGFLTSAISPFPKQEESKKQQKEAETTDDESEDDEDGGAPTAFIPITDEDRIL
MMTEGITSADSLFAYRLMGEFYQHLEEYDSNVELMRKAREHLASERRKTDLKFQNTENSF
LVCLGTALVFFQSPRHHQEAKALFDSVLEKDPTATPALIGVGLIFEEEEEYDDAIDFLER
ALTRDPSNLRVRTEAAWVKAQKGNYSSCKEELEKCIPLLEEEGQPMKSLLAQTQYRLGVC
IWNIDTSKAARKSRSGAYAHFLACLKNDLNFAPAYTSLGIYYEECSRDKNRARKCFLKAV
ELSPSEVDAAERLARSLADERDWDGVELVSQRVVDSGKVRPPPGSKRKGLSWPFAALGVA
ELNKQDYAKAVVSFQSALRISPDDYHSWVGLGESYYNSGRYIAATKATLNAQQLENTSSG
PRDANDVWFTKFLLANIKRQLSSYDEAIALYKEVIEKRPGEDGVSIALMQTMVESALSSI
DKGLFGKAVDLAIGTITFATTASSNISETFNFWKAVADSCSVFSIVQGRVGEFPVDFVRT
LIGEDDEAPHYETFKDVDGVGVRVIQAKGLFSDDEKLGVHLTQCLQATILAHKRAIHACA
NDVHAQAVAYFNLGWAEYRAHSCLPVSLKKKSSRYLKAAVRAFKRAIELEAGNSEFWEAL
GVVTSSINPSVAQHAFVRSLYLNERSPSAWANLGTLALLQNDVQLANEAFTKSQSADPDY
AHAWVGQGFVALLYGDPREARGLFTHAMGISGVASAPVRQQYAVSMFDHIVAASPHETTP
IGAILQPIFALSQLRALKPQHELAVGHLLALFHERVGHHAESVAVIEPMCAALEADYETT
ESAESLRKFALAKADLARAYLADESYEKAVESGEMALQLSSEGDESELRPEERNKARLSS
HLALGLAQYYNDAVDEAVQYFESALEESGGDADAICVLAQVLWAVGTEEAQDRARSSLFE
VVEKQPDHVRSVLLLGAIALLDDDDESLEAVVAELQGLRASDKVGAVEQSHISDILQAVA
ALSAEGADKVRGQAQTDIMLHPYLPHGWINLSSVVDFDAGASANAAEVAVELARRAVAPR
GNLDAEDLARTYAGATKAADAQTAIAVAPWVKDGWNGFSTSRTCTTTSLVRQVSRVSGSA
AEGGKGDVPARSSRPGEVRSAARRRAFAVAVREGRGGSGFGRVDKRLESQVCDGGGRDWE
MRDARICKAASSISKMEVL
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggcagctttgaaggcgattggcgagctcatccggcagtccaagtggggcgat
gccatagaggaagctcgacagtttgtgcaaaaggaaccaaagagttttcaggggcacata
tttctggcttttgcactggacaagaatcagaaactggaggagtctgaacagagctattta
gctgctgctgctttgaagccagatgaccctcagccatggcagggcttagtcaagctgtat
cagaaacagggtggcaacaagatagcggcgtacaaagtagctgccctcgagttggcacaa
cgctatagagatatgaatgacatgtacagatgtcaatgcgctattgacgactttactaaa
catgcccaggcccagggagaggccagctacgtagaggcacttgaggttatcctgcccgac
agtccaatctacccggctcttgagggccgtgtgccacaccctgcaaagacgtacgagacg
atagccaggttcatcgagacgcaggagaagaaaaggatcaacacccttatcggcgagcga
cgcacaagaattggtgctagagtcagcgaggtcacaattgaagttaagcgggaagtctgg
ggccgaagcagactaggccatatttatcgcgagattatcaactggacaaacgatgacgaa
cttcgccgagtctatgaggaaaagctgctccaacactgttatgatcgcctgcttgtgttt
gctcctggacctgacaagacagtcgagctcgaggttgtccagaaactagcgagagacatg
gtcattatcaagcatccattcaaacttgcttgggatatcacaattgactggcaagaccac
aaagaaataagggagtgggatgttagcatcttgcgcgactactgcaccttcttcccagat
agcgacctgtacaagataatcacagggttcttgacgagtgccatatctccatttccaaag
caagaggagtcgaagaagcaacagaaagaggccgaaactaccgatgacgagagcgaagac
gatgaggatggaggcgcaccgacagcgttcatacccattacggacgaggatagaatcctg
atgatgacagaaggcatcacttccgctgactctttgttcgcctatcgactcatgggcgaa
ttctatcagcacctggaagagtacgacagcaacgttgagttgatgcgcaaagcccgagaa
catctggctagcgagaggcggaagacagacctgaagtttcaaaacacggagaactcgttt
ctggtctgcctgggtaccgctcttgtcttcttccagtctccaaggcatcatcaagaggcc
aaggctctctttgatagcgtcctcgaaaaagacccgacggccaccccggcgctcattggt
gttggtttgatcttcgaagaggaagaagaatatgatgatgcaatcgacttccttgagaga
gccttgacgcgggatccaagcaacctacgagtcagaacagaggctgcctgggtcaaggct
cagaaagggaactactcaagctgcaaagaggagctggagaaatgcatcccgctactggaa
gaagaaggacagccgatgaagagcctgctggcgcaaacgcagtaccgcctcggcgtttgt
atatggaacatcgacacctccaaggcggcccggaagagccgcagtggcgcatatgcacac
tttttggcttgtctcaaaaatgacctgaacttcgcccctgcctacacgagtctcgggatc
tactacgaagaatgctcaagagacaaaaaccgcgctcgtaaatgttttctgaaagctgta
gagctgtcaccatctgaggtcgacgctgcggaaagacttgcgaggtcccttgccgacgaa
agggattgggacggtgtcgaactggtttctcaacgcgtcgttgactctggcaaggtcagg
cctccgcccggctctaagagaaaagggctgagctggccgtttgccgcgcttggcgttgca
gaactcaacaagcaggattatgccaaggcagtggtgtcatttcagtcggcattgcgtatc
agtccagacgattatcactcatgggttggactcggtgagagttactacaactctggtcgc
tacattgcagcgaccaaggccacactcaacgcccagcagttggaaaacacatcgtctggt
ccccgggatgctaatgatgtgtggtttaccaaatttctgctggccaatattaaacgccaa
ttgagctcatacgacgaggcgattgctttgtacaaggaggtcattgaaaaacggcccggc
gaggatggtgtctcaattgccttgatgcagactatggtggagagtgcgctgtccagcata
gacaagggattgtttggcaaagctgtggacttggctatcggcaccatcacgttcgcgacc
actgcttcttccaacatatccgaaaccttcaatttctggaaggcggtcgccgattcgtgc
tcagtgttctcgattgtccaaggccgggttggtgagtttcccgttgatttcgtacgtacg
ctcattggcgaggacgacgaggctcctcactatgaaacgttcaaggacgtggatggcgtt
ggtgtcagggtcatccaggcaaagggcctattctcggacgatgagaagttgggcgttcat
cttacccaatgcctccaggccaccatactcgcacacaaacgggccattcacgcatgtgca
aatgacgtgcatgcacaggctgttgcatattttaatcttggctgggccgaatatcgagcc
catagttgcctgcctgtttccctgaagaagaagagcagccgctatttaaaggcagccgtc
agggctttcaagcgtgcaattgagcttgaagccggcaactcggagttttgggaggcttta
ggcgttgtcaccagcagcatcaacccatcggttgctcagcatgctttcgtgcgaagtcta
tatctcaacgagcgtagcccttccgcttgggctaacttggggactctagctcttctccag
aacgacgtccagttggcgaatgaggcttttaccaagtcgcagtcggctgatcccgactac
gcacatgcttgggttggacagggcttcgtggcactgctatacggtgaccctcgcgaggct
cgcggcctctttacgcacgcaatgggcatttctggcgttgcttcagcgcccgtgcggcag
caatacgccgtgtccatgtttgatcacattgtggcagcttctcctcatgaaaccactccg
atcggagccattctgcagcctatattcgccctcagtcaactccgcgcattgaaaccccag
cacgagctcgcagtaggccatcttcttgccctcttccacgagcgtgttggtcatcacgct
gagagcgtcgcagttattgaaccgatgtgtgcagccctagaggcagactacgaaacaact
gaatctgcagagtcactccgcaagttcgcccttgccaaggcagacttagctcgtgcctac
ctcgcagatgaatcatacgaaaaggctgtcgagtctggtgagatggctcttcaactgagc
agcgaaggcgatgagagcgagcttaggccagaggaacgtaacaaagctaggctgtcgtcg
cacctggcgttggggctggcgcagtactacaacgatgctgtcgacgaggcggtccagtat
ttcgagtctgcattagaggagtcgggtggagatgcagacgcaatttgtgttctggcacag
gtcctctgggccgttggaactgaagaggctcaagacagagccagaagctcgttgttcgag
gtggttgagaagcaacctgatcatgtgcgttcggtccttcttctcggtgccatcgctctc
ttggacgacgacgatgaaagcctcgaggcagtagtggcagagctacagggcttgcgagcc
agcgacaaggtcggggctgtcgagcagtcgcatatcagcgatatactgcaggccgtggca
gcattgtcagctgaaggcgccgataaggtcaggggtcaagcgcagacggatataatgctg
cacccttatctaccacacggctggatcaacctgtcatccgttgtggatttcgatgctggc
gcctccgcaaatgcagccgaggtcgctgttgaattggcgcgcagggcggttgcaccgagg
ggcaacctagacgcagaggacctagcgcgcacatatgcgggtgcgacgaaggccgccgat
gcacagacggccatcgccgttgcgccatgggtgaaggatggatggaatgggttctcgacg
tccaggacctgcacaaccacgtccctggtcaggcaggtttctcgggtctctgggtcggcg
gcggagggtggaaagggtgacgtcccggcccggtcgagcaggcccggggaggtcaggtcc
gcggccaggaggcgggcttttgcggttgccgtgagggagggcaggggtggcagtggcttt
gggcgcgtggacaagaggttggagagccaggtttgcgacgggggtggtagggattgggag
atgagagatgcgcggatttgcaaagctgcctcgtccatttcgaaaatggaggtgttgtga
DBGET
integrated database retrieval system