Pyricularia pennisetigena: PpBr36_07156
Help
Entry
PpBr36_07156 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03013
Nucleocytoplasmic transport
ppei03015
mRNA surveillance pathway
ppei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PpBr36_07156
09122 Translation
03013 Nucleocytoplasmic transport
PpBr36_07156
03015 mRNA surveillance pathway
PpBr36_07156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_07156
03041 Spliceosome [BR:
ppei03041
]
PpBr36_07156
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PpBr36_07156
TREX complex
PpBr36_07156
Spliceosome [BR:
ppei03041
]
Complex C
Other components
EJC/TREX
PpBr36_07156
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PpBr36_07156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_PARP14_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
40736599
NCBI-ProteinID:
XP_029748320
LinkDB
All DBs
Position
1:1985053..1986824
Genome browser
AA seq
256 aa
AA seq
DB search
MSAGKLDKSLDEIVSSQRRTAGRRGGAARRSTGRPAPAAPVGGIHKNTKATRSAVQKPAP
AKASGVPGTSKVVVSNMPKDVSEAQIKEYFGQTVGPVKRVEISYGPGGVSRGIATVTFAH
ADGASKAFAELNGLLIDNKPAKVEVVVASADQIPAPKTLSQRVTQNKAQPKSAATDKRGA
TAGKGSGAQANGAKGAKKVAPRKGRNARPAKKTAEELDSEMADYFQGGETNTEAAANGAA
PVATNGGDAAMEDDIL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggaaagcttgacaagtctctcgacgagatcgtctcgtctcaacgccgcacg
gccggtcgccgcggcggcgctgcccgtcgctccactggccgcccggcccccgccgcccca
gttggtggcatccacaagaacaccaaagccactcgcagtgccgtccagaagccggcgcct
gctaaggcctctggagttcccggaaccagcaaggttgttgtgagcaacatgcccaaggac
gtgtccgaagcgcaaatcaaggaatacttcggtcaaaccgttggacctgtaaagagggtc
gagatctcatacggacccggtggagtcagccgtggtatcgccacggttaccttcgcccat
gccgacggtgccagcaaagcttttgctgagctgaacggtcttcttattgacaacaagccc
gccaaggtggaagtcgtcgtcgcgtctgccgaccagatccccgcgcctaagaccttgagc
cagagagtcacgcaaaacaaggcgcagcccaagtctgctgcaactgacaagcgaggtgcc
accgctggtaaaggttctggtgctcaggcgaacggcgcaaagggtgcgaagaaggtcgcg
ccgcggaagggtcgcaacgcacgcccggcgaagaagacagctgaggagcttgactctgag
atggccgattacttccagggtggcgagaccaacacagaggcagcagccaacggggcagcc
cctgtagccaccaatggtggtgacgctgccatggaggatgacattttgtaa
DBGET
integrated database retrieval system