KEGG   Pyricularia pennisetigena: PpBr36_07156
Entry
PpBr36_07156      CDS       T08194                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
ppei  Pyricularia pennisetigena
Pathway
ppei03013  Nucleocytoplasmic transport
ppei03015  mRNA surveillance pathway
ppei03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PpBr36_07156
  09122 Translation
   03013 Nucleocytoplasmic transport
    PpBr36_07156
   03015 mRNA surveillance pathway
    PpBr36_07156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppei03019]
    PpBr36_07156
   03041 Spliceosome [BR:ppei03041]
    PpBr36_07156
Messenger RNA biogenesis [BR:ppei03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PpBr36_07156
    TREX complex
     PpBr36_07156
Spliceosome [BR:ppei03041]
 Complex C
  Other components
   EJC/TREX
    PpBr36_07156
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PpBr36_07156
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_PARP14_3 RRM_occluded
Other DBs
NCBI-GeneID: 40736599
NCBI-ProteinID: XP_029748320
LinkDB
Position
1:1985053..1986824
AA seq 256 aa
MSAGKLDKSLDEIVSSQRRTAGRRGGAARRSTGRPAPAAPVGGIHKNTKATRSAVQKPAP
AKASGVPGTSKVVVSNMPKDVSEAQIKEYFGQTVGPVKRVEISYGPGGVSRGIATVTFAH
ADGASKAFAELNGLLIDNKPAKVEVVVASADQIPAPKTLSQRVTQNKAQPKSAATDKRGA
TAGKGSGAQANGAKGAKKVAPRKGRNARPAKKTAEELDSEMADYFQGGETNTEAAANGAA
PVATNGGDAAMEDDIL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgtctgccggaaagcttgacaagtctctcgacgagatcgtctcgtctcaacgccgcacg
gccggtcgccgcggcggcgctgcccgtcgctccactggccgcccggcccccgccgcccca
gttggtggcatccacaagaacaccaaagccactcgcagtgccgtccagaagccggcgcct
gctaaggcctctggagttcccggaaccagcaaggttgttgtgagcaacatgcccaaggac
gtgtccgaagcgcaaatcaaggaatacttcggtcaaaccgttggacctgtaaagagggtc
gagatctcatacggacccggtggagtcagccgtggtatcgccacggttaccttcgcccat
gccgacggtgccagcaaagcttttgctgagctgaacggtcttcttattgacaacaagccc
gccaaggtggaagtcgtcgtcgcgtctgccgaccagatccccgcgcctaagaccttgagc
cagagagtcacgcaaaacaaggcgcagcccaagtctgctgcaactgacaagcgaggtgcc
accgctggtaaaggttctggtgctcaggcgaacggcgcaaagggtgcgaagaaggtcgcg
ccgcggaagggtcgcaacgcacgcccggcgaagaagacagctgaggagcttgactctgag
atggccgattacttccagggtggcgagaccaacacagaggcagcagccaacggggcagcc
cctgtagccaccaatggtggtgacgctgccatggaggatgacattttgtaa

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