Pyricularia pennisetigena: PpBr36_07277
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Entry
PpBr36_07277 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PpBr36_07277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_07277
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PpBr36_07277
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
PpBr36_07277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
40736720
NCBI-ProteinID:
XP_029748760
LinkDB
All DBs
Position
1:2403991..2404930
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AA seq
279 aa
AA seq
DB search
MPLDTSAYSLALLRVDGRRWNELRRCHAQIRTQAAADGSSYLEMGHTKVMCVVTGPSEAA
PGQRRTGINITANATGGGASSQSKEAEVVVSIVVAGFSSVDRKKRGRGDKRIQELQATVS
HALSATLHTHLFPHSTITFSLHVLSQDGSLLAALINAATLAAVDAGIPMADYVVACSAGS
TSSYAAADESADPLLDLNQQEETELPGLTAATLGATDRVVVLSCESRVQASRLEGMLAVA
VDGCKQVREILDRVVKERGRQMIREGAIEKADALMMDME
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggacacatcagcatactccctcgcgctcctgcgcgtagacggccgacgatgg
aacgagctgcggcgctgccacgcgcagatccgcacgcaggccgccgccgacggctccagc
tacctcgagatgggacacaccaaggtcatgtgcgtggtgacggggccgagcgaggcggcg
ccgggccagaggaggacgggcatcaacatcacggcgaacgcgacgggcggtggcgccagc
tcccagtccaaggaggccgaggtggtcgtcagcatagtggtcgcggggttcagctcggtg
gataggaagaagcgcggccggggtgacaagcgtatacaagaactccaggcgacggtctcg
catgccctctcggcgaccctccacacccacctcttcccgcacagcaccatcaccttctcc
ctgcacgtcctgtcgcaggacggatcgctgctggccgcgctgatcaacgccgccacgctc
gccgctgttgacgccggaatccccatggccgactacgtggtcgcctgctcggccggctcg
acttcgtcctacgccgccgccgacgagtccgctgatccgctgctggacttgaaccagcag
gaggagacggagctgccggggctgacggccgcgactctgggggcgacggaccgcgtggtc
gtgctctcgtgcgaaagcagagtccaggccagccggctagaaggcatgctggctgtcgcg
gtcgatgggtgcaagcaggtcagggagattctggacagggtcgtcaaggaaaggggcagg
caaatgatccgcgagggtgcgatagaaaaggcggatgcgctcatgatggatatggagtaa
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