KEGG   Pyricularia pennisetigena: PpBr36_07841
Entry
PpBr36_07841      CDS       T08194                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
ppei  Pyricularia pennisetigena
Pathway
ppei03030  DNA replication
ppei03410  Base excision repair
ppei03420  Nucleotide excision repair
ppei03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PpBr36_07841
   03410 Base excision repair
    PpBr36_07841
   03420 Nucleotide excision repair
    PpBr36_07841
   03430 Mismatch repair
    PpBr36_07841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppei03032]
    PpBr36_07841
   03036 Chromosome and associated proteins [BR:ppei03036]
    PpBr36_07841
   03400 DNA repair and recombination proteins [BR:ppei03400]
    PpBr36_07841
DNA replication proteins [BR:ppei03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PpBr36_07841
  DNA Replication Termination Factors
   ELG1-RFC complex
    PpBr36_07841
Chromosome and associated proteins [BR:ppei03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PpBr36_07841
DNA repair and recombination proteins [BR:ppei03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PpBr36_07841
  Check point factors
   HRAD17(Rad24)-RFC complex
    PpBr36_07841
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 AAA_16 AAA_assoc_2 AAA_lid_RFC1 AAA_22 AAA_19 AAA_30 AAA_11 AAA_24 DUF815 RCF1-5-like_lid SLFN-g3_helicase RuvB_N AAA_5 DNAX_ATPase_lid AAA_28 AAA_18 AAA_3 Chlam_OMP PhoH Mg_chelatase SRP54 ResIII AAA_25 CobA_CobO_BtuR AAA_7 TniB bpMoxR nSTAND3 AAA_SpoVK_2nd ATPase_2 RNA_helicase nSTAND6
Other DBs
NCBI-GeneID: 40737280
NCBI-ProteinID: XP_029748942
LinkDB
Position
1:complement(<4540745..>4541977)
AA seq 410 aa
MSDFEDEMEIDAPPPAAAITFSSAATEKGKRSAANLPVEAEDSLPWVEKYRPVSLADVSG
HQDILATVNKFVDANRLPHLLLYGPPGTGKTSTILALARRIYGADNVRQMVLELNASDDR
GIDVVREQIKTFASTKQIFTMGSKPTPAATAAAAASSSSSNSNNPSAARPTPSYKLIILD
EADAMTNTAQMALRCIMEKYTANTRFCIIANYAHKLSPALLSRCTRFRFSPLKEADIRVL
VDRVVEEETVNIRPDAVDALVRLARGDMRRALNVLQACHASSTPLREKGAAADAAAVVRD
TITVETIYNCIAAPPPEAIKEILDTLLATSDVVSCLGTINALKATRGLALADIITALSEE
LVKLEVKPEVMITWLDGLAEIEHRVAGGAGEAVQTGAVVGVVRRGVELMG
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgtccgatttcgaagacgaaatggaaatcgacgcaccgcccccagcggccgccataacc
ttctcctcagcggccacagaaaagggcaagcgcagcgccgctaacctccccgtcgaggcc
gaggactcgctaccctgggtggaaaagtaccgccccgtatcactcgccgacgtgtctggc
caccaggacattttggccacggtcaacaagtttgtcgacgcaaaccgcctgccccacctg
ctgctgtacgggcccccggggacgggcaagacgtcgacgatattggcgctggccaggagg
atctacggcgccgacaatgtgcggcagatggtgctggagctgaacgcgtccgatgaccgc
ggaatcgacgtggtcagggagcagatcaagacgtttgcgagcaccaagcagatctttacc
atggggtcgaaacctacaccggcggcaacagcagcagcagcagcatcatcatcatcatca
aacagcaacaatccctcggcggcccgcccgaccccctcctacaagctcatcatcctggac
gaggccgacgccatgaccaacacggcacagatggcgctccggtgcatcatggaaaagtac
acggccaacacgcgcttctgcatcattgcaaactacgcccacaagctgtcgcccgccctg
ctgtcccgctgcacgcggttccgcttcagcccgctcaaggaggccgacatacgcgtgctg
gtggaccgcgtcgtcgaggaggagaccgtcaacatccgcccggacgccgtcgacgccctg
gtccggctcgccaggggagacatgcgccgcgccctcaacgtcctgcaggcctgccacgcg
agcagcacaccgctgcgggagaagggcgcggccgccgacgccgccgcagtggtcagggac
accatcacggtcgagacgatatacaactgcatcgcggcgccgccgccagaggccatcaag
gagatcctcgacaccctgctggccaccagcgacgtcgtgtcgtgcctcggcaccatcaac
gcgctcaaggccacgcgcggcctggccctcgcggatatcatcaccgcgctctcggaggag
ctggtcaagctcgaggtcaagcccgaggtcatgatcacgtggctggatgggctggcggag
atagagcaccgcgtcgccggcggcgccggagaggccgtgcagacgggcgccgtggttggt
gttgtgaggaggggggtggagctgatgggttga

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