Pyricularia pennisetigena: PpBr36_07976
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Entry
PpBr36_07976 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PpBr36_07976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppei03021
]
PpBr36_07976
Enzymes [BR:
ppei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PpBr36_07976
Transcription machinery [BR:
ppei03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
PpBr36_07976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BCDHK_Adom3
Motif
Other DBs
NCBI-GeneID:
40737414
NCBI-ProteinID:
XP_029746808
LinkDB
All DBs
Position
5:complement(44680..49836)
Genome browser
AA seq
1718 aa
AA seq
DB search
MNISQPVSSSIDSVSFELLSADEIRAFSVRRIENDSTFDTLLNPVPGGLYDPALGAWGDS
VCATCNLGPSACPGHPGHIELPVPVYHPVFMDQVLRLLRSQCAYCHRFRMRRRDIHRYVC
LFRLLQYGLLAEAKRLDLIGDSLEGVSEGDTPEGDDSETEDAHGGKTTEDVVIRKRNAYV
RQVLQQHQISLGEIRKGKHEGASEMRRDLVKQFLQDMTKSRICASCNGVSPTYRKDRFVK
IFEKPLSSKDQGKMAQGRFKLRDAMAIRQKPKPDEGYQSDEAVPDAGLPSEESSGEESVD
GDDLDEQGNVVQLPKPKSKKSEAAPSQRYLSAREVLERLDLLFEKEQEVLSLFYNSKPSH
KSTKHINAGLFFVQTLLVPPNRFRPEARTGDSQINEAQQNSLYKAILKASTKLTQIFRDL
QNPTSLLSQRHGKDTTILHEAWTELQDCVNTLIDNTKSPTQGAAAKALEEGIKQKLEKKE
GLFRKNMMGKRVNYAARSVISPDPNIETNEIGVPPVFARKLTYPEPVTSHNFRDMQQAVI
NGPDKWPGAAAIENENGQIVNLRNKSQEERASLANQLLAPTSNNSGNMRNKKVHRHISNG
DVVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADFDGDEMNMHFPQNEVAR
TEALQLADTDHQYISGTQGKPLRGLIQDHLSVSVGLCNKDTYLDRSAYHELVYNALRPES
GHILRERIELVPPAIIKPKARWTGKQVITTVLRNIRPLDCGDLWMTGKTQVPAHAWGVHT
EEGQVLFRDGEFISGILDKAQLGPSSGGLVHAVHEVYGPAIAGKLLSAMGRLLTRYLNMR
AFTCGMDDLKLTPEGEADRRNIIDSRAHLVGLEVAAKYVSLDQHKPANDDPELLRRLEEV
MRDDTKQEGLDGLMNSGSKDLSQDITKACLPKGLEKQFPKNQMQAMTISGAKGGQVNANL
ISCNLGQQVLEGRRVPLMVSGKSLPCFKPFETDIRAGGYIVNRFLTGIRPQEYYFHHMAG
REGLIDTAVKTSRSGYLQRCLIKGMEGLEIGYDNSVRDADGSLVQFLYGEDGLDVTKQKY
LKDFTFILHNIKSELAQLNISDPRTLPLFELRDEILKQNKSNLKKAKANPRFFTGEPVSS
MLNPTRYAYATSEKFFDAMSSYVKENPDALIKDKDDKQRSSGPQSSSLVRLNRKAAEKVL
SAKYMRSLVHPGEAVGIVAGQSVGEPSTQMTLNTFHLAGHSAKNVTLGIPRLRELLMTAS
SKISTPSMTLILNEELSPADGERFAKAISMLPLSHVVDKATVFERIGTSINHKLAKMFDV
RLRFFPSAEYTKTYAITTSDVLNTVETKFMSTLRRLVAKEIKSKGLKESAATPAIGEKVG
TVEMAAPNVGENGPLDEDDDSDDGEGDATADKQKANRSEAVSYGPNDEEDDLIQRQQEQE
AEFEDEGLGGSPAPELPKNPSADDDASMHMELDDVAQAKAKDRELRVRDKNPECTRFRCD
EAAGEWCEITLEYDIGIPKILMLSLVQDAVRKALVQQIPGIKSGTFVAKEKVTDPWTGQD
SDVSLVHTAGSNLRAMQQYGSFINPNRISTNDVAAVLEIYGVEACRANIIRELRAVFESH
AITVDNRHLNLIADHMTRSGGFTPFNRMGLSGNVSPFTKMSFETTLAFLKDAVLDGDWDD
LSTPSGRLVMGRLGHVGTGAFDVFTQAPMSHFDAVAAS
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctcacagcctgtctcgtcgtccatcgacagcgtttctttcgaattgctctcg
gccgacgagatcagggcgttttccgtgcggaggatcgagaatgatagcaccttcgatact
ctactgaatcccgtgcccggaggcctctacgatcccgctctgggagcatggggtgactcg
gtatgcgcgacctgcaatcttgggccctccgcctgccccggtcaccccggtcatatcgag
cttcccgtccctgtctaccaccccgtcttcatggaccaggtccttcgtctcctgagatcg
caatgcgcatattgtcacagatttcgcatgcgccgcagagatatacatcgatacgtttgt
cttttcaggcttctgcagtacggattgcttgccgaggccaagcgcttagacctgatcggt
gacagccttgaaggcgtgtctgaaggtgacaccccagagggcgacgattccgagaccgaa
gatgcccacggtggtaagactaccgaggatgtagtcatacgcaaaaggaacgcttatgtt
cgccaggtgctccaacaacaccagatcagcctcggcgagattcgcaagggcaaacacgag
ggcgcttctgaaatgcgaagggatcttgtgaagcagtttcttcaggacatgaccaagtcg
agaatctgcgccagctgcaacggagtctcgccgacatatcgcaaagatcgattcgtcaag
atctttgaaaagccactatcgtccaaagaccagggcaagatggctcaaggccgcttcaaa
ctgcgcgacgccatggcaatccgccagaagcccaaacccgacgagggatatcaatcggat
gaggccgttcctgatgctggcctcccatcggaggaatcctcgggcgaagagagtgtcgat
ggagatgaccttgacgagcagggtaacgtagtgcaactgccaaagcccaagtccaagaag
tccgaggcggcaccatcgcaacgatatctcagcgcccgggaagtcttggagaggttagac
ttgttgttcgagaaggagcaagaggtcctcagcctcttctacaattcaaaacctagtcac
aagagcaccaagcatatcaatgccggcttgtttttcgtgcagactctcctggtcccacca
aatcgatttcggccggaagcgcgaactggagattcacaaatcaacgaggcacagcagaac
agtctttataaggcaatcttgaaggcatctaccaaactcacccaaatcttccgcgacttg
caaaacccaacctccctactgtcgcaacgccacgggaaggatacgacgattcttcacgag
gcctggactgagctacaagactgcgtcaacaccttgatcgacaacaccaagagccccacg
cagggtgctgctgcaaaggcgctcgaagaaggcatcaagcagaagttggagaagaaggag
ggtcttttcaggaagaatatgatggggaagcgagtaaactacgctgctcgcagtgttata
tccccggaccctaacatcgaaaccaacgagattggcgtcccaccagtctttgcgcggaaa
cttacctatccagaacccgtcacaagccataactttagagatatgcaacaggccgttatt
aacggccctgacaaatggcctggagcagcagccattgagaacgagaatggtcagatcgtg
aatttgaggaataagtctcaggaggagcgtgcttctcttgccaatcagcttctggcccca
accagcaataattctggaaacatgcgcaacaaaaaggttcaccgtcacatctcgaatgga
gatgtcgtcctcatgaaccgtcaaccaaccctccacaagccctccattatgggacatcga
gtccgagttctgccaggcgagaagaccatcaggatgcactatgccaactgcaacacctac
aacgcagattttgatggagacgaaatgaacatgcacttcccccagaacgaggttgctagg
acagaggcactgcagctggctgacacggatcatcaatacatatcaggcacccagggcaag
ccgcttcgaggtctcatccaggatcacttgtccgtatcggtgggtctgtgcaacaaggac
acttacctggaccgcagtgcataccacgagctcgtctacaatgctctacgtcccgagagc
ggtcacattctcagggaacgcatcgagctggtgccaccagccatcataaagcccaaagcc
cggtggaccggaaaacaagtcatcacaacagttctgcgaaacataagacctcttgattgt
ggtgacctctggatgacgggtaagacccaggttcccgcacatgcgtggggtgttcatacc
gaggaaggccaggtcctattccgtgacggcgagttcatctcgggcattctcgacaaggcg
caactgggtccaagctctggtgggcttgtacacgctgtgcatgaggtgtatggtccggcc
atcgccggcaagcttctcagtgccatgggccgtctgctcaccaggtacctgaacatgcgt
gctttcacttgtggcatggacgaccttaagcttacaccggagggtgaagcggatcgaaga
aacattattgactcacgggcacatcttgtgggacttgaggttgcagccaaatatgtcagc
ctggaccagcacaagccggcgaatgatgacccagagcttctgcgacgccttgaggaggtc
atgcgtgatgatacaaaacaggaaggcctcgatgggttgatgaattctggaagtaaagat
ttgtctcaagatatcacaaaggcctgccttcccaagggccttgagaagcaattccccaag
aatcaaatgcaggccatgaccatttcgggagcgaagggtggacaggtcaacgcaaacctc
atctcgtgcaatctcggccaacaagttttggaaggcaggcgagtgcccttgatggtcagc
ggcaagtctctcccctgcttcaagccctttgagacggatataagggctggcggttacatc
gtcaaccgtttcttgactggcatcaggccacaggagtactatttccaccacatggctgga
cgtgagggtttgattgacacagctgtcaagacttcgcgctcgggttacctgcagcgatgc
ctgatcaaaggcatggagggcctcgagatcggctacgacaactcagtccgtgacgcggat
ggctcgctcgtgcagttcttgtacggtgaggatggtctggatgtgacgaagcagaaatac
ctcaaggactttaccttcatattgcacaacatcaaatcggagctggcgcagctcaacatc
tcggatcctagaactcttccattgttcgagcttcgcgatgagatcttgaagcagaacaag
tccaacctaaagaaggccaaggcaaaccccaggttcttcactggagagccagtcagctcc
atgctcaatccgacgcgctacgcttatgcgacgtcggaaaagttttttgatgccatgtct
tcttatgtcaaagaaaaccccgacgccctcatcaaagacaaggatgacaagcaaaggagc
tctgggccccagtcctcctcacttgttcgtctcaaccgcaaggctgctgagaaggttctg
tcggcaaagtacatgcgatccttggtgcatcccggcgaggctgttggtatcgtggccggt
caatccgtcggcgaaccgtcaacgcagatgacactcaacacgttccatctggcaggtcac
tcggccaagaacgtcacactgggtattccgcgtctgcgagagctgctcatgacggcaagc
tccaaaatctcgacaccttccatgacgctgatactgaacgaggagctgtcgcctgcggat
ggtgagaggtttgcaaaggccatcagcatgcttccgctttcgcacgtcgtcgacaaggcc
accgtctttgaacgcatcggcactagcatcaaccacaagctggccaaaatgtttgacgtc
cggctgcggttcttcccgtcagccgaatacaccaagacgtatgcaatcaccacttccgat
gtcctgaacacggtagagaccaagtttatgagtaccctgcgcagacttgtggccaaggag
attaagtcaaagggcttgaaggaaagtgcggccaccccggcaattggtgagaaggtcggc
acggtggagatggctgcgcccaacgtgggcgagaacgggcctttagatgaggatgacgac
agcgacgatggcgagggagatgcgacagcagataagcagaaggcaaaccggagcgaagcg
gtatcgtacgggcccaacgacgaagaggatgacttgatccagaggcagcaagagcaggaa
gctgaattcgaggatgaaggtctcgggggaagccctgcgccagagttgcccaaaaaccca
tctgctgacgacgacgccagcatgcacatggagctcgacgatgtcgcgcaagcaaaggcc
aaagacagggagctgcgggtgcgcgataagaacccagagtgtacaagattccgatgtgac
gaagcggctggcgagtggtgcgagattacgctcgagtatgacataggcatcccaaagatt
ttgatgctgagcctggttcaagatgccgtccgcaaagcactcgtgcagcagataccaggt
atcaagtcgggcacctttgtcgctaaggagaaggtaacggacccctggacgggccaggac
agcgatgtctcgttggtgcacactgctggctccaacctgcgcgcaatgcagcagtacggg
tccttcatcaacccgaatcgcatctccaccaacgatgtggcagctgtgctcgaaatctat
ggtgtggaggcttgtcgcgccaacatcatccgcgagctgcgtgccgttttcgagtcccac
gccatcacagtcgacaatcgccacttgaacctgattgccgatcacatgacgcgcagtggc
gggttcacgcccttcaatcgtatgggacttagcggcaacgtaagccctttcaccaagatg
agtttcgagacaacattggcgttcctaaaggacgccgtactggatggtgactgggacgac
ctgtcgacgcctagtggaaggctcgtgatgggcaggctgggacacgtgggcacgggagca
tttgatgtctttacgcaggcacctatgagtcactttgatgcggtcgcagccagctga
DBGET
integrated database retrieval system