Pyricularia pennisetigena: PpBr36_08243
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Entry
PpBr36_08243 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PpBr36_08243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppei03019
]
PpBr36_08243
Messenger RNA biogenesis [BR:
ppei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
PpBr36_08243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
YL1
Macoilin
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
40737679
NCBI-ProteinID:
XP_029746775
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Position
5:complement(973491..976337)
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AA seq
877 aa
AA seq
DB search
MEEPLDFKALQDKIQAALVATTRKVNLIATQDIAFRRSVDPEAGELLDEQREKLLSLASS
LVNTATSLGGGKSSKPKRALELEDAEEVDDNWQAIVDSLDIALEKADTCIDEYTGLVKRK
DAPTADMGPTAKKSKPGILDRSLRYANIIKPQKTFEVAPNNHDKGPWKPLLTKKPHAMVP
LDKSLATFDNEDSETQYDYLLHLSLLVPPLSGEERANPAKRRVYNQKIRKLRYKGDTRGT
NGVFRYKHPYETEILQSRHPESVYQKRDPIPYTPIAKSSPTYVDTYEGVLEMLEELKQAK
EIAVDLEHHDFRTYHGLLSLMQISTREKDWIVDTLKPWRQQLEILNEVFADPSIVKVFHG
AFMDIVWLQRDLGLYVVSLFDTFHAAEALMYPSKSLAYLLKKFVDFEADKRYQTADWRIR
PLPEEMLYYARSDTHYLLYVYDMMRNELLRQSVSGDPHGDLLERTLQRSKETALQRYEAY
TIDGETGRGSRGWFNLIHRLPNTFSREQFSVYRALHKWRDDVARREDESPMFLMSNQLLV
DIARAMPETAADLRNLFTNVGPPVRNAVNELVDLIRDSRQKGATGPTLLEVIKADSTNAA
FSNMTLADAYRSAKTTTAGQADDDIPEAVEVAGSRSQLWGNLPMSTLWEKVSNKVASSAR
GVEDHIAVPWSSFVANAQITEDDGTGALGQVEVDEMDVDEDGGAPVKLEAETSAKVKDEE
FTLRSGRSDGAGRAQEDDDSSASSSDEDSEEKQRLKAEKQQRKEERRALKKKLKEEKAAK
KAEERAARRAEKKALKAAAKAEEAEEDDSEESDDEQPFDYSKAQSVMRSKRDHGADKKGS
GGAKVFDPYTSKTTAQGPKPARKMNFEKPGKTATFKK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccgctcgatttcaaagctctgcaggacaagatccaagcagcgctcgtcgca
accacccgcaaggtcaacttgatcgcgacccaggacattgcatttcgccgtagtgtcgat
ccggaagccggagagctattggacgaacagcgtgagaagctcctcagtctggcatcatca
ctcgttaacacggccacgagcttgggaggcggcaagagctcgaagcccaagagagctttg
gagctggaagacgcggaagaagttgatgacaactggcaggccattgtcgactcgctagat
atcgccctcgaaaaggccgatacctgcattgatgagtacacagggcttgtgaagaggaag
gatgcgccgactgcagacatgggcccaaccgccaaaaaatcgaaaccgggtatccttgat
agatccttacgctacgcaaatataatcaagccccaaaagacattcgaggttgcgcccaac
aaccatgacaaaggcccttggaagccgcttttgaccaagaagccccatgccatggtcccc
cttgacaagagcttggccaccttcgataacgaggattcagagacacagtacgactacctt
cttcacctatccttgcttgtgccaccgctctcgggagaagagcgcgcaaatcccgccaag
cgaagggtctataatcaaaagatacgaaagttgcggtacaagggtgacactcgaggtact
aatggcgttttcaggtacaaacatccatacgagacagaaatactgcaatcgagacaccca
gaaagcgtataccagaagcgcgatcccataccgtacacgcccatcgctaaatcctcgccg
acctatgtcgacacctatgaaggtgtgctggagatgctggaggagctcaagcaggccaag
gaaatcgcagttgatcttgagcatcacgacttcagaacctaccacgggctgctctcgctg
atgcagattagcactagagagaaggactggattgtcgatactctgaagccatggaggcaa
caactggagattctgaacgaagtgtttgctgacccgagcatcgtcaaggtgttccacggc
gccttcatggacattgtgtggcttcagagggatctggggctttacgtcgtctcactcttc
gatactttccacgcggctgaggcgcttatgtatcctagcaagagccttgcgtatctcctc
aaaaagtttgtcgacttcgaggcggacaagcggtatcagactgccgattggcgaatcagg
ccattaccagaggagatgctttactatgcgcgctcggatacgcattacctgctgtatgtg
tatgacatgatgaggaatgagctcctgaggcaatccgtcagtggcgatcctcacggggac
ctactcgagaggacgcttcagaggtcgaaggaaacggctctccagcgttacgaggcatac
acgatcgacggagaaacaggtcggggctcgcgcggctggttcaatctgattcatcgattg
cccaacactttcagcagagagcagttttccgtttaccgggcactgcacaagtggcgtgac
gatgtggcccggcgcgaggacgaaagccctatgtttttgatgtcaaaccagttactcgtg
gacatcgcacgggctatgccagagacggctgccgatctacgaaacctcttcacaaacgtg
ggcccgccggtgaggaacgccgtgaacgagcttgtagatctgatacgggattctcgacaa
aagggggcgactggcccaacgcttttggaggtaatcaaggccgatagtacgaatgctgca
ttttccaacatgacgttagcggacgcatacagaagtgcgaagacgacaactgcaggccag
gctgatgatgacataccggaagccgtagaggttgcaggttcacggtcacagttatggggc
aatcttccaatgagcaccttgtgggagaaggtatctaacaaggtagcttcatcggccaga
ggagttgaagatcatattgctgtgccctggagctcgtttgttgccaacgcccagatcact
gaagatgatggcacgggtgctttgggccaggtggaggtggatgagatggatgttgatgaa
gacggaggcgctccggtcaagctggaagccgagacaagcgccaaagtaaaagatgaagag
tttacgctgcgctctggacgttcagatggagcagggagggcacaggaggacgacgattcg
tcggccagctcgtcggatgaggactctgaagagaaacagcgcctcaaggctgagaagcaa
cagcgaaaggaagagcgacgtgcactgaagaagaagctcaaggaagagaaggctgcaaag
aaggccgaggaaagggctgccaggagagcagagaagaaagcgttgaaagcggctgccaaa
gcggaagaagcggaggaagatgacagcgaagagagtgacgacgagcagccatttgactac
agcaaagcacaatcagtcatgcgtagcaagcgggatcatggagctgacaagaagggcagc
ggtggtgccaaggttttcgatccatataccagcaagacgactgcgcaagggcccaagccg
gcaaggaaaatgaattttgagaaacccggaaagactgcgacgttcaagaagtag
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