Pyricularia pennisetigena: PpBr36_08755
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Entry
PpBr36_08755 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03022
Basal transcription factors
ppei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PpBr36_08755
09124 Replication and repair
03420 Nucleotide excision repair
PpBr36_08755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppei03021
]
PpBr36_08755
03400 DNA repair and recombination proteins [BR:
ppei03400
]
PpBr36_08755
Transcription machinery [BR:
ppei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PpBr36_08755
DNA repair and recombination proteins [BR:
ppei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PpBr36_08755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
40738185
NCBI-ProteinID:
XP_029747361
LinkDB
All DBs
Position
5:complement(<2738922..>2740394)
Genome browser
AA seq
490 aa
AA seq
DB search
MSQQPIITLSDHLEKQNGATFKKLYQQPATAFAIFRRMLPPLAKTFVMSLLYMPQPLPLT
ALDSWVKPEAKKNKDQALSILRSMHITTITPVTKEKPIQEMSLTPNFKKSLRLALEGGGS
HNSFGVPSSLPIPPQVDVAFLDKWARSRWDAILHYVVNSVEETDSMEPSKKYNFGGSKLQ
DTVKTLLVQGGLVQRRSSERISITKTGFTFLLQEANAQVWTLLLQWLHSVNEDNTNRAVD
MLSFLFMLGTLELGQAYDTGALSEERRNMLPDLNDFGLVYIPPSNPDQYFPTRLATTLTS
GSSALRSVSSGVAAATAEAGENNTKGAIILETNFRIYAYTSTPLQIAILALFANLKMRFA
GMVTGQLSRHSIKRAISHGITADQIIEYLASHAHEQMHRIAAIRNKPVLPPTVVDQIRLW
QLETERMQVQRGYLFKDFESQAEFKAIADYADEVGVLIWRSDARQLFFASKTAEIANFIK
SEKHRKKLAA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacaaccgatcattacgttatccgatcatctcgagaagcagaatggcgccact
ttcaagaagctataccaacagccggctacagctttcgccatctttcgccggatgcttccc
ccattagccaaaacctttgtcatgtcgcttctttatatgccacagccgctgccgcttact
gctctggactcttgggtgaagccagaagcgaagaagaacaaggaccaggcgctgtccatt
ctacgttctatgcacattaccaccatcactccggttaccaaagaaaagcccatacaggaa
atgtccttgacgcccaacttcaaaaagtccttacggctagcccttgagggcggcggctcc
cacaattcattcggcgtcccatcaagccttccgataccaccacaggttgatgttgcattt
ttggataagtgggcacggtcaagatgggatgccattttacactatgtggtcaacagcgtt
gaagagacggactcaatggagccaagcaaaaagtacaactttggaggttcaaagcttcag
gatacggtcaaaactctgctggtgcagggtgggcttgtccagcgccgaagctcggagagg
atcagcatcacaaaaacaggctttacatttctcctgcaagaggcaaacgcccaggtatgg
acgttgctcctgcagtggctacacagcgtcaacgaggacaacactaatagggcagtcgac
atgttgagcttcctgtttatgcttggtactctggagcttggtcaagcctacgacacaggg
gcactctcagaagaacgtcgtaatatgctgcctgatttgaacgattttggtctggtatac
atcccgcccagcaacccagatcaatactttcccactcgtctcgccaccactctcaccagt
gggtcttctgcgctcaggagtgtcagctcaggcgttgcggccgccaccgcggaagcgggc
gagaacaataccaagggggccatcattctcgagaccaatttccgcatctatgcgtacacg
agcacgccgctccagatagccatcctagcactttttgccaacctaaagatgcgcttcgca
gggatggttactggacagctgagtcggcactcgatcaagcgtgccatttcccacggtatc
acagccgaccaaatcatcgaatacctggcatcgcacgcgcacgagcaaatgcaccgcatc
gcggcgatccgcaacaagccagtcttgccaccaaccgttgtggatcagatccgtttgtgg
caacttgagacggaacgcatgcaggttcagaggggctacctgttcaaggatttcgagagc
caggccgaattcaaggccatcgccgactacgctgatgaggttggtgttttgatatggcgc
agcgatgcccggcagctcttctttgccagcaaaacagcagagattgccaactttatcaag
tcggagaagcaccgtaagaagcttgctgcctag
DBGET
integrated database retrieval system
