KEGG   Pyricularia pennisetigena: PpBr36_08793
Entry
PpBr36_08793      CDS       T08194                                 
Name
(RefSeq) hypothetical protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
ppei  Pyricularia pennisetigena
Pathway
ppei03018  RNA degradation
ppei03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PpBr36_08793
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PpBr36_08793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppei03019]
    PpBr36_08793
   03041 Spliceosome [BR:ppei03041]
    PpBr36_08793
Messenger RNA biogenesis [BR:ppei03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PpBr36_08793
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PpBr36_08793
Spliceosome [BR:ppei03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PpBr36_08793
 Complex C
  U2 snRNP components
    PpBr36_08793
SSDB
Motif
Pfam: LSM Hfq AEP1 Muskelin_N
Other DBs
NCBI-GeneID: 40738223
NCBI-ProteinID: XP_029747239
LinkDB
Position
5:complement(2863331..2863907)
AA seq 95 aa
MCSFFKTLIDVEITVELKNSIQIRGTLKSVDQYLNLKLDDISVVEDIKYPHLSAVKNVFI
RGSVVRYIHLPASHVDVPLLEDATRREAASTAAKR
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtgctccttcttcaagacgctgatcgacgtcgagatcaccgtcgagctcaagaacagc
atccagatccgcggcaccctcaagagcgtcgaccagtaccttaacctcaagctcgacgac
atatccgtcgtggaggatatcaaatatccgcatctgagcgccgtcaagaatgtctttatc
cgtggaagcgtagtcaggtatatccacctgcccgcttcccacgtcgacgtcccgcttctg
gaggacgcgacgaggagggaggcggcttctacggcggcgaagcgttaa

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