Pseudonocardia petroleophila: H6H00_02340
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Entry
H6H00_02340 CDS
T08626
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ppel
Pseudonocardia petroleophila
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppel03021
]
H6H00_02340
Transcription machinery [BR:
ppel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H6H00_02340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_24
HTH_AraC
KORA
MarR_2
HTH_Crp_2
HTH_28
HTH_3
MarR
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QNG52910
UniProt:
A0A7G7MJE9
LinkDB
All DBs
Position
485060..485839
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AA seq
259 aa
AA seq
DB search
MTRGDSEYGHLAPLLERYASLPADDPARERLRDELVTGFLPVAQHIARRFAHRGEPLDDL
VQVATVGLINAVDRFSPDRGSDFFSFAVPTISGEVRRHFRDLGWSMRVPRRLKDLHVSIN
GAVSHLAQEIGRAPRPSEIAQHLGISVSDVLEGLEASEVYRSSSLDEMLSSDAGSATVGE
LVGEADAELARVDFMQALRPVMSELPERERTIVLLRFFGNRTQTQIAEEVGISQMHVSRL
LSQTLDRLRSRLDPDTRVG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaggggcgattccgagtacggccatctggcacccctgctggagcggtacgcctca
ctgcctgccgacgacccggcccgcgagcgcctgcgcgacgagctggtcaccggtttcctg
cccgtggcccagcacatcgcccggcgcttcgcgcaccgcggcgagcccctcgacgacctg
gtccaggtcgcgaccgtgggcctgatcaacgccgtcgaccgcttctcccccgaccgcggc
tccgacttcttctccttcgccgtgcccacgatcagcggcgaggtgcggcggcacttccgc
gacctgggctggtcgatgcgggtgccgaggcggctcaaggacctgcacgtgtcgatcaac
ggcgccgtgtcgcacctcgcccaggagatcgggcgcgccccgcggcccagcgagatcgcc
cagcacctcggcatctccgtctccgacgtcctggaggggctggaggcctcggaggtctac
cgcagctcctcgctcgacgagatgctgtcctccgacgccggcagcgccacggtgggcgag
ctcgtcggcgaggccgacgccgagctcgcccgcgtcgacttcatgcaggccctgcggccg
gtcatgagcgagctgcccgagcgcgagcgcacgatcgtgctgctgcggttcttcggcaac
cgcacgcagacccagatcgcggaggaggtcgggatctcgcagatgcacgtctcgcgcctg
ctctcccagaccctcgaccggctgcgcagccggctcgaccccgacacccgcgtcggctga
DBGET
integrated database retrieval system
