Pseudonocardia petroleophila: H6H00_05180
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Entry
H6H00_05180 CDS
T08626
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppel
Pseudonocardia petroleophila
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppel03000
]
H6H00_05180
Transcription factors [BR:
ppel03000
]
Prokaryotic type
Helix-turn-helix
Other families
H6H00_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
GAF
AAA_16
HTH_50
Sigma54_activat
HTH_17
HTH_28
AAA
HTH_30
AAA_22
HTH_22
HTH_29
Sigma54_activ_2
Phage_NinH
nSTAND3
AAA_30
HTH_23
TsaE
AAA_19
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QNG53381
UniProt:
A0A7G7MKS0
LinkDB
All DBs
Position
1048234..1050024
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AA seq
596 aa
AA seq
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MRPAPDGGSEQLARARTSFLVDEEVEPGVVREPILASWTRSRHYDVDADRLELPYDSDIS
MDSQLTRAAGPIIREVADQLASEPVSLILTDADGVVLDRRSGDGGLTHHLDRIWLAPGFS
YAERYVGTNGIGTALEGRGPAQVFGHEHYAEHLEDLACAGAPIRHPVSGKVLGVVDLTCW
RSDANMMMTAIASTVAKRIEETLLEQSGRRELALLHDYLIACQRGRGAVFALSDDLLMMN
DRARELFDPSDQGPLLAEAGEALKSGQRHQVLVDLPSGNTARIQLRPSWTEGNRAGGIAQ
VQLITNGAVPTPRTSTSSPALPAAVGSGALWTKCCQAVDRHFRAREWLVLEGEPGTGKTT
VARATHQGRTPAAHLRVLDAADAGPRWFADVAEELQTGGGTLVLTHVDSLDPDGVQALCD
VLEEHRDTTDPERPWVVATVTAGTGSPEHLGELLGHFPSTVEVPPLRHHVEDVSELVPYL
IARLTRGAELTCSPEAMRVLMRNRWPGNIEQLYQVLRKVVAKRRTGIVSPADLPAECRAI
TRRVLTPLEAIECDAIVDALLDASGNKAEAARHLGMSRATIYRKIRGYGISMPTSG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccgctcccgacggcggctccgagcagctcgcccgcgcccgcacctccttcctc
gtggacgaggaggtggagcccggcgtcgtccgggagccgatcctcgcctcgtggacgcgc
tcccggcactacgacgtcgacgccgaccggctcgagctgccctacgactccgacatctcg
atggactcgcagctcacccgggcggccggcccgatcatccgggaggtcgccgaccagctc
gccagcgagccggtcagcctgatcctcaccgacgccgacggtgtcgtcctcgaccgccgc
agcggcgacggcgggctcacccaccacctcgaccgcatctggctcgcgcccggcttcagc
tacgccgagcgctacgtgggcacgaacgggatcggcaccgcgctcgagggccgcgggccc
gcgcaggtgttcggccacgagcactacgccgagcacctcgaggacctggcctgcgccggg
gccccgatccggcaccccgtgagcggcaaggtcctgggcgtcgtcgacctcacctgctgg
cgcagcgacgccaacatgatgatgaccgcgatcgcgtccaccgtcgcgaagcggatcgag
gagacgctgctggagcagtccggccgccgcgaactcgcgctgctgcacgactacctcatc
gcctgccagcggggtcgcggcgcggtgttcgcgctcagcgacgacctgctgatgatgaac
gaccgcgcccgcgagctgttcgacccgtccgaccaggggccgctgctggccgaggcgggc
gaggcgctcaagtccggccagcgccaccaggtcctcgtcgacctgcccagcggcaacacc
gcgcgcatccagctgcggcccagctggaccgagggcaaccgcgcgggcggcatcgcgcag
gtccagctcatcaccaacggcgccgtgcccaccccgcggacgtccacctcctcgcccgcc
ctcccggccgcggtcgggtcgggcgcgctgtggaccaagtgctgccaggccgtcgaccgg
cacttccgcgcccgcgagtggctggtgctcgagggcgagccggggacgggcaagaccacc
gtcgcgcgggccacccaccagggccgcacccccgcggcccacctgcgggtcctcgacgcg
gccgacgccggcccgcgctggttcgccgacgtcgccgaggagctgcagacgggcgggggc
acgctggtcctcacccacgtcgacagcctggaccccgacggcgtgcaggcgctgtgcgac
gtcctcgaggagcaccgcgacaccaccgaccccgagcgcccctgggtcgtcgcgaccgtc
acggcgggcaccgggtcccccgagcacctcggtgagctgctggggcacttcccgagcacc
gtcgaggtgccgccgctgcgccaccacgtcgaggacgtctccgagctggtgccctacctg
atcgcgcggctcacccgcggggccgagctgacctgctcccccgaggcgatgcgcgtgctc
atgcgcaaccgctggcccggcaacatcgagcagctgtaccaggtgctgcgcaaggtcgtg
gccaagcggcgcaccgggatcgtctcgcctgccgacctgcccgcggagtgccgcgccatc
acccggcgcgtgctcacgccgctggaggccatcgagtgcgacgcgatcgtcgacgccctg
ctcgacgcgtcgggcaacaaggccgaggcggcccggcacctcgggatgtcgcgggccacc
atctaccgcaagatccgcggctacgggatctcgatgcccacctcgggatga
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