Pseudonocardia petroleophila: H6H00_10755
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Entry
H6H00_10755 CDS
T08626
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ppel
Pseudonocardia petroleophila
Pathway
ppel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
H6H00_10755
09124 Replication and repair
03420 Nucleotide excision repair
H6H00_10755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppel03021
]
H6H00_10755
03400 DNA repair and recombination proteins [BR:
ppel03400
]
H6H00_10755
Enzymes [BR:
ppel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H6H00_10755
Transcription machinery [BR:
ppel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
H6H00_10755
DNA repair and recombination proteins [BR:
ppel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
H6H00_10755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
QNG54322
UniProt:
A0A7G7MNG1
LinkDB
All DBs
Position
2126673..2128334
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AA seq
553 aa
AA seq
DB search
MTDGPLIVQSDKTLLLEIDHADAGAARVAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVRFSRYAVPQALLVDVVDTMGRYGRLQLVQSPVHGLVLVALDRAVLEEVL
RQKKISPLLGARVDDDTVIVHPSERGHLKQALLKIGWPAEDLAGYVDGEAHPIALAEDGW
NLRDYQRQAVEGFWAGGSGVVVLPCGAGKTLVGAAAMAQAQATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRKSKGEYRHLELFDSRDWGLVIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWRDIEQQGWIAP
ADCVEVRVTLTDAERMSYAVAEAEERYRMASTAHTKLAVVKSIIARHPGEPTLVIGAYLD
QLDELGEALDAPVIQGSTRNKEREVLFQQFRQGDLPVLVVSKVANFSIDLPEASVAIQVS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSVVSRDTLDTDYAAHRQRFLAEQGYAYRIVD
ADDLLGPAVPDVG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatggaccactcatcgtccagtccgacaagacgctcctgctggagatcgaccac
gccgacgcgggtgccgcccgcgtcgcgatcgcgccgttcgccgagctggagcgcgcaccc
gagcacgtccacacctaccgggtcaccccgctcgcgctgtggaacgcccgcgcggccggg
cacgacgccgagcaggtcgtcgacgcgctggtgcggttctcccgctacgccgtgccgcag
gcgctgctcgtcgacgtggtcgacacgatggggcgctacgggcggctgcagctcgtccag
tcgccggtgcacgggctggtgctcgtggcgctcgaccgcgccgtgctggaggaggtcctc
cggcagaagaagatctcgccgctgctcggtgcgcgcgtcgacgacgacacggtgatcgtg
cacccgtccgagcgcgggcacctcaagcaggcgctgctcaagatcggctggcccgccgag
gacctcgccgggtacgtcgacggcgaggcgcaccccatcgcactggccgaggacggctgg
aacctgcgcgactaccagcgccaggccgtcgagggcttctgggcgggcggctccggggtc
gtcgtgctgccctgcggggcgggcaagacgctggtgggcgcggccgcgatggcgcaggct
caggccaccacgctgatcctggtcaccaacaccgtcgccgggcggcagtggaagcgcgag
ctcatcgcccgcaccagcctcaccgaggaggagatcggcgagtactccggcgagcgcaag
gagatccgcccggtcacgatcgccacctaccaggtgatcacccgcaagtccaagggcgag
taccggcacctggagctgttcgactcccgcgactggggcctggtcatctacgacgaggtg
cacctgctgcccgcccccgtgttccggatgacggccgacctgcagtcccggcgccgcctc
gggctcacggccacgctcgtccgcgaggacggccgcgagggcgacgtcttctccctgatc
gggcccaagcgctacgacgccccgtggcgcgacatcgagcagcagggctggatcgccccg
gccgactgcgtcgaggtccgggtcaccctgaccgacgccgagcgcatgtcctacgccgtc
gcggaggccgaggagcgctaccggatggcgtccacggcgcacacgaagctcgccgtcgtg
aagtcgatcatcgcgcggcaccccggcgagccgacgctcgtcatcggggcctacctcgac
cagctcgacgagctcggcgaggcgctcgacgccccggtcatccaggggtccacccgcaac
aaggagcgggaggtcctgttccagcagttccgccagggcgacctgccggtgctggtggtc
agcaaggtcgcgaacttctcgatcgacctgccggaggcgagcgtcgcgatccaggtgtcg
ggcaccttcggctcgcggcaggaggaggcccagcgcctcggccggctgctccggcccaag
ggcgacgggcgtcaggcgcacttctactccgtggtctcccgcgacacgctcgacaccgac
tacgccgcccaccggcagcgcttcctggccgagcagggctacgcctaccgcatcgtcgac
gccgacgacctgctcggcccggccgtccccgacgtggggtag
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