Pseudonocardia petroleophila: H6H00_12115
Help
Entry
H6H00_12115 CDS
T08626
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ppel
Pseudonocardia petroleophila
Pathway
ppel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H6H00_12115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppel03021
]
H6H00_12115
03400 DNA repair and recombination proteins [BR:
ppel03400
]
H6H00_12115
Enzymes [BR:
ppel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H6H00_12115
Transcription machinery [BR:
ppel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H6H00_12115
DNA repair and recombination proteins [BR:
ppel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H6H00_12115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QNG54560
UniProt:
A0A7G7MP49
LinkDB
All DBs
Position
2395682..2399596
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDVNFFDELRIGLATAEHIREWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVNKELRHNDLSTLETEMSVERKRVENRRDTDLEERAQKLEAD
LAELEAEGAKGDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWTAFTKLDVQQLIADESI
YRELYDRYGDYFTGAMGAEAIQTLLQNFDIPAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQTTGNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
SQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQSEARVLMLSSNNILSPASGRPLAMPRLDMVTGIYHLSRLREGAHGEGG
IYSSVAEAIMAYDRKVLHLQAPMKIRLHGVTPPAAIAESIGWSEGDPWLADTTLGRVLFN
ELLPADYPYVNEILPKKRQAMIINDLAERYSMTEVAQCLDRLKDAGFYWATRSGVTMAVS
DVIVPPNKQEILDGYEVKAEQVNKRYLRGALSHQERNDEMVKIWTQASEEVARAMEANFP
EDNPIPTIVKSGAAGNMTQVRQLAGMRGLVANPKGEYIPRPIKANFREGLSVLEYFISTH
GTRKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCGTERGVTMAVTEETSDGRLIPHR
YLRTSVYARTAGEDAIGADGSVVIRRGEDLGDPALDAIVAAGVKTIKVRSPLTCTSATGI
CGMCYGRSMATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGDDITTGLPRVQE
LFEARVPKGKAPIADVDGRIAIEDGERFWKITLTPDDGGEEIVYEKLSKRQWLAMTTVDG
QERPLADGDHVHVGQLLLEGTADPHEVLRVMGPREVQLHLVREVQKVYRTQSVDIHDKHI
EVIVRQMLRRVTIIDSGATEFLPGALAERADFETQNRRVVAEGNEPASGRPVLMGITKAS
LATESWLSAASFQETTRILTDAAINGKRDKLVGLKENVIIGKLIPAGTGIARYRDIQVQP
TEEARAAAYALPSYDDGYYSPDVFGTGTGAAVPLDDYDFGRDYR
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgaactgcgcatcggcctggccaccgcggagcacatc
cgtgagtggtcccacggcgaggtcaagaagcccgagacgatcaactaccgcacgctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgcgagcgctgcggcgtg
gaggtcacgcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgccccg
gtcacgcacatctggtacttcaagggtgtgccgagccggctgggctacctgctcgacctg
gcgcccaaggatctcgagaagatcatctacttcgcggcctacgtgatcacgtcggtcaac
aaggaactgcgccacaacgacctgtccacgctcgagaccgagatgagcgtggagcgcaag
cgggtcgagaaccggcgcgacaccgacctcgaggagcgggcccagaagctcgaggccgac
ctggccgagctcgaggccgagggcgcgaagggcgacgtccggcgcaaggtcaaggacggc
ggcgagcgcgagatgcgccagctccgtgaccgcgcgcagcgcgagctcgaccggctcgac
gagatctggaccgcgttcaccaagctcgacgtgcagcagctcatcgccgacgagtcgatc
taccgggagctctacgaccggtacggcgactacttcaccggcgccatgggcgccgaggcg
atccagacgctgctgcagaacttcgacatcccggccgaggccgagaacctgcgggagacc
atccgcagcggcaaggggcagaagaagctccgcgccctcaagcgcctcaaggtcgtcgcg
gcgttccagaccaccggcaactcgccgatgggcatggtgctcgactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccacgtccgacctc
aacgacctgtaccgccgggtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccggccggtgacgggcccgggcaaccggccgctcaag
tcgctgtccgacctgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtcatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgcgaagcgcatggtcgagcgcggccgc
tcgcaggtgtgggacgtgctcgaggaggtcatctccgagcacccggtgctgctcaaccgg
gcaccgaccctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagctccacccgctggtgtgcgaggcgttcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgctgtcggccgaggcgcagtccgaggcgcgcgtcctgatgctg
tcgtcgaacaacatcctgtcgccggcgtcgggccgtccgctggccatgccgcgtctggac
atggtcacgggcatctaccacctgagccggctgcgcgagggcgcacacggcgagggcggg
atctactcctcggtcgccgaggcgatcatggcgtacgaccgcaaggtgctccacctgcag
gcgccgatgaagatccgcctgcacggggtcaccccgcccgccgcgatcgcggagtccatc
ggctggtccgagggcgacccgtggctggccgacaccacgctgggtcgggtgctgttcaac
gagctgctcccggccgactacccgtacgtcaacgagatcctgccgaagaagcgccaggcc
atgatcatcaacgatctggccgagcggtactcgatgaccgaggtcgcgcagtgcctcgac
cggctcaaggacgcgggcttctactgggccacgcgctccggggtcacgatggccgtctcc
gacgtcatcgtgccgccgaacaagcaggagatcctcgacggctacgaggtcaaggccgag
caggtcaacaagcggtacctgcgcggggcgctgtcccaccaggagcgcaacgacgagatg
gtcaagatctggacccaggcgtccgaagaggtcgcccgggccatggaggccaacttcccc
gaggacaacccgatcccgacgatcgtcaagtcgggcgcggcgggcaacatgacccaggtc
cggcagctcgccggtatgcgtggtctggtggccaaccccaagggcgagtacatcccccgt
ccgatcaaggccaacttccgtgagggcctgtcggtgctggagtacttcatctccacgcac
ggcacccgcaagggcctcgccgacaccgcgctgcgcaccgccgactcgggctacctgacc
cgtcgtctggtggacgtgtcgcaggacgtcatcgtccgcgaggtcgactgcggcaccgag
cggggcgtcacgatggccgtcacggaggagacctccgacggccgcctgatcccgcaccgc
tacctgcgcaccagcgtctacgcccgcaccgcgggcgaggacgcgatcggcgccgacggc
tcggtcgtcatccgtcgcggtgaggacctcggcgacccggcgctcgacgcgatcgtcgcg
gccggcgtcaagacgatcaaggtgcgcagcccgctcacctgcacgtcggccaccggcatc
tgcggcatgtgctacggccgctcgatggccaccggcaagctggtcgacgtcggcgaggcg
gtcggcatcgtcgcggcgcagtcgatcggtgagcccggcacccagctgacgatgcgcacg
ttccacaccggtggtgtggcgggtgacgacatcacgacgggtctgccgcgtgtccaggag
ctgttcgaggcccgcgtccccaagggcaaggccccgatcgccgacgtcgacggtcgcatc
gcgatcgaggacggcgagcgcttctggaagatcaccctcaccccggacgacggtggcgag
gagatcgtctacgagaagctgtccaagcggcagtggctcgcgatgaccacggtcgacggc
caggagcgtccgctggccgacggcgaccacgtgcacgtgggccagctgctcctcgagggc
acggccgacccgcacgaggtgctgcgcgtcatgggtccgcgtgaggtgcagctgcacctc
gtgcgtgaggtgcagaaggtgtaccgcacgcagagcgtcgacatccacgacaagcacatc
gaggtgatcgtccggcagatgctgcgccgggtcacgatcatcgactcgggggccacggag
ttcctgcccggcgcactcgccgagcgggccgacttcgagacccagaaccggcgcgtcgtg
gccgagggcaacgagcccgcgtccggccgcccggtcctgatggggatcacgaaggcctcg
ctggccacggagtcgtggctgtccgcggcctcgttccaggagaccacccggatcctcacc
gatgccgcgatcaacgggaagcgcgacaagctcgtcgggctcaaggagaacgtgatcatc
ggaaagctgatcccggcgggtacgggcatcgcccgctaccgcgacatccaggtccagccc
acggaggaggcccgcgcggccgcctacgcgctgccgagctacgacgacggctactacagc
cccgacgtgttcggcacgggcaccggtgccgcggtgccgctggacgactacgacttcggc
cgcgactaccgctag
DBGET
integrated database retrieval system
