Pseudonocardia petroleophila: H6H00_12325
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Entry
H6H00_12325 CDS
T08626
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppel
Pseudonocardia petroleophila
Pathway
ppel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H6H00_12325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppel03021
]
H6H00_12325
03400 DNA repair and recombination proteins [BR:
ppel03400
]
H6H00_12325
Enzymes [BR:
ppel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H6H00_12325
Transcription machinery [BR:
ppel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H6H00_12325
DNA repair and recombination proteins [BR:
ppel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H6H00_12325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QNG54598
UniProt:
A0A7G7MP87
LinkDB
All DBs
Position
2431031..2432077
Genome browser
AA seq
348 aa
AA seq
DB search
MLISQRPTLAEDSVVDTRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGPVTAGDIVPPAGVTVHN
PDLHIATLNDKGRLEVELVVERGRGYVPAMQNKATGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVLDVETKPSITPRDALASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAFAMPIEELDLTVRSYNCLKREGIHTVGELVGRSEADLLDIRNFGAKSIDEVKMK
LVGLGLALKDSPPGFDPSAAAAEYGSDTYDADQPFGDDGQDYAETEQL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgccccaccctggccgaggactcggtcgtcgacacccgctcccgg
ttcgtcatcgagccgctggagcccggtttcggctacacgctgggcaactcgctccggcgc
acgctgctgtcgtccatcccgggcgcggcggtcaccagcatccgcatcgacggcgtgctc
cacgagttcaccaccgtcccgggggtgaaggaggacgtcaccgacatcatcctgaacctc
aaggagctggtcgtgtcctccgaggaggacgagccggtcacgatgtacctgcgcaagcag
ggccccggcccggtcaccgcgggcgacatcgtcccgcccgctggcgtcaccgtgcacaac
ccggacctgcacatcgccacgctcaacgacaagggccgcctcgaggtggagctcgtcgtc
gagcggggtcgcggctacgtcccggccatgcagaacaaggccaccggcgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtcctcaaggtgacctacaaggtcgaggcc
acccgcgtcgagcagcgcaccgacttcgacaagctggtgctcgacgtcgagacgaagccc
tcgatcaccccccgcgacgcgctggcctcggccggcaagacgctcgtcgagctgttcggg
ctcgcccgcgagctgaacgtcgacgccgagggcatcgagatcggcccgtcgccgcaggag
gccgacaccatcgcggccttcgcgatgccgatcgaggagctcgacctcacggtccgctcc
tacaactgcctcaagcgcgagggcatccacaccgtgggcgagctcgtcggccgcagtgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaagatgaag
ctcgtcggcctcgggctcgcgctcaaggacagcccgcccggattcgacccgtcggccgcc
gccgccgagtacggctccgacacctacgacgccgaccagccgttcggcgacgacggccag
gactacgcagaaacggagcagctgtag
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