Pseudonocardia petroleophila: H6H00_17790
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Entry
H6H00_17790 CDS
T08626
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppel
Pseudonocardia petroleophila
Pathway
ppel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H6H00_17790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppel03400
]
H6H00_17790
Enzymes [BR:
ppel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H6H00_17790
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H6H00_17790
DNA repair and recombination proteins [BR:
ppel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H6H00_17790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
DUF6487
Motif
Other DBs
NCBI-ProteinID:
QNG50119
UniProt:
A0A7G7MBF8
LinkDB
All DBs
Position
3568842..3569636
Genome browser
AA seq
264 aa
AA seq
DB search
MPELPEVELARTVLRDALHREIASIDDNDDWVCRPHPPGQIAAALVGGELTAAHRRGKTM
WCETSVRGDAGPELGIHLGMGGQIVVDGKVGPTGPEHRNPGARKPEWDRFTVNFADGGSL
RLFDKRRLGRVRLDPDHEALGPDAEVITRDEFRTRVGRGHSAVKARLLDQTVLAGVGNLL
ADETLWQASISPATPADELRPKDLDRLYDSLESSLKAAIAHGGVHTGEVVPYRNADAACP
RCGSHMLHGTVGGRSTWWCAKEQR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgaggtcgagctggcccgcacggtcctgcgcgacgccctgcaccgc
gagatcgcctcgatcgacgacaacgacgactgggtctgccgcccgcacccgcccggccag
atcgccgccgcgctggtcggcggggagctcaccgcggcgcaccggcggggcaagacgatg
tggtgcgagacgtcggtgcgcggtgacgcgggccccgagctgggcatccacctggggatg
ggcgggcagatcgtcgtcgacgggaaggtcgggccgaccggccccgagcaccgcaacccg
ggcgcccgcaagcccgagtgggaccgcttcaccgtgaacttcgccgacggcggctcgctg
cggctgttcgacaagcgccgcctgggccgcgtccgcctcgacccggaccacgaggcgctg
ggccccgacgccgaggtgatcacccgcgacgagttccgcacgcgggtcgggcgcgggcac
tccgcggtcaaggcgcgactgctcgaccagaccgtcctcgccggcgtcggcaacctgctc
gccgacgagacgctgtggcaggcgtcgatctccccggcgacgcccgccgacgagctgcgc
ccgaaggacctcgaccgcctctacgacagcctggagtcgtcgttgaaggcggccatcgcg
cacggcggcgtgcacaccggtgaggtcgtcccgtaccgcaacgccgacgccgcgtgcccg
cgctgcggctcgcacatgctgcacggcaccgtcggcggccgctccacgtggtggtgcgcg
aaggagcagcgctag
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integrated database retrieval system
